Empidonax traillii (willow flycatcher): 114069898
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Entry
114069898 CDS
T05887
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etl03016
]
114069898 (LCMT2)
Enzymes [BR:
etl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
114069898 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
114069898 (LCMT2)
Transfer RNA biogenesis [BR:
etl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114069898 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Kelch_5
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_1
Motif
Other DBs
NCBI-GeneID:
114069898
NCBI-ProteinID:
XP_027762809
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MSITERLRGFACSLHTGVPGCRDSCSPGAPGSQGSPAAGPTARCRSPSPSPALPGVPHRA
LPVPAFCQPRSPLRPGPQPPPGASAAPLSAVPAAGLPCGGTVPVPSRPVPSRPAAASAGA
AGSPVRPRVRCAAPPWARPPDTPLPPPRSIVCAAEAEQSGRSRCRTGPPVRRCRRAGQRA
GGERGPVPGAGTYTARPSPAALASRRVRPRRDVPPPLRCSGAEIAPVPPAAPAPRYSPVP
RLSRCGGGPAKRSPADRSWLGAEAPAETRPSAALSPPLPPPPPSPPRTGARRRSADPGQP
RAGGGPGAGRDRGWERCSGPGGWLGPGFGAALPIAVLGGGVSAVPLSRQVQGTGGSSAVS
KCSAAARGYIQDRFQRLLAGRQRRRAPLIHRGYYVRARAVDHCVQDFLLKTQSHPRTQVL
SLGAGFDSLYFRLKDMGLLHHTVVYEVDFPSVVCQKATLIKRMEELSALVGDTAGEGLGA
ITFSGEDYKLLGVDLSELSELERALEEVGLDNEIPTLFIAEVVLTYMENSRSDALIQWAA
ERFPRACFLLYEQVHPEDPFGRVMQQHFSQLNSALHSLTQYPDCEAQQRRFLGRGWTECS
VMDMNEFFTCCIPEDEQQRVQALEPFDEYEDWHLKCSHYFVLTASKGMDPSWTPLLPSVT
VPHHAGPVGMAGSIPAAVCARLSGIPGLRRYGHCSVLIKPDVILTTGGFGEEDGQHCRLR
NFHVLSKHAGCWKADCVTKKHPDKRWGERLYHTVSCVSDSLALVVGGRMSPSSAGLGMLW
LKFPETYNASDPDDIAVELVNPQPAAEPATLRWRHSTTEVSFKGEQYLFVYGGRSALEPV
LGDWYFLHTRELSSTLIAVEGPVPESRHSHSACSWEGGVLIAGGLGAAEQPLGSVFLLRE
LEHGFRWQAVETHPPLIPRYSHTAHVHEGKLLLVGGVWFHTSSVPGITVIDLMTGLCLDY
VINVEHLEWPLMLHNHSSVFLPNEKELLVIGGGGNCFSFGTHLNPEPVSLSLDSILTSH
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaccgagaggctgcggggcttcgcctgctccctgcacaccggtgtccccggc
tgtcgggactcgtgctcccccggagctccgggctcccagggctccccggccgccgggcct
accgcccgctgccgctccccgtccccgtccccagcgctcccgggcgtcccgcaccgggcg
ctcccggtgccggcgttctgccagcctcgctccccgctccgcccgggcccgcagcccccg
cccggcgcctctgcggctccgctgagcgccgtccccgcggcgggtctgccctgcggcggc
accgtgcccgtcccgtcccgtcccgtcccgtcccgcccggccgctgccagcgccggggcc
gcggggagcccggtgcggccgcgggtccgctgtgctgcgccgccgtgggcgcgccccccc
gacacccccctcccgcccccccgctccattgtctgcgcggcggaggcagaacaaagcggc
cggtcccggtgccggaccgggccccccgtgcggcgatgccgccgtgcggggcagcgggcg
ggcggcgagcgcgggccggtccccggcgctggcacttacaccgcgcgtccctcgccggcg
gcgctcgcatcccgcagggtccggccccgccgcgatgtcccgccgccgctccgctgctcc
ggtgccgagatcgctccggtaccgccggccgctccagcgccccggtactccccggtgccg
cggctgtcccggtgcggcggtggccccgcgaagcgctcgccggcggatcggagctggctc
ggcgcggaggctcctgctgaaacccgacccagcgccgccctcagccccccgctccccccg
ccgcccccatccccgccccgcaccggagcgcgccggcggagcgcggacccggggcagccc
cgggcgggcgggggtccgggggcgggacgtgaccgcgggtgggagcgatgctccgggccc
gggggctggctcggaccggggtttggagcggcgctccccatcgcggtgctgggcggaggc
gtcagcgccgtgccattgtcccggcaggtccagggcaccggcggcagcagcgccgtcagc
aagtgctcggcggcagcgcggggctacatccaggaccggttccagcggctcctggcgggg
cggcagcgccggcgagcgccgcttatccaccggggttattacgtccgtgcccgtgctgta
gatcactgtgtccaggacttcctgctgaagacacaaagccaccctaggacacaggtcctg
tctttaggtgctggctttgactccttatacttccgtttgaaggacatgggtcttctgcat
catactgtggtatatgaggtggattttccaagtgtggtgtgccaaaaagctactctgatc
aaaagaatggaagagttgtcagcactggtgggagacactgcaggggaaggattaggagcc
attaccttttctggagaggattataaattactaggagtggatttatcagagctgtctgag
ctggagagagccctggaggaagtaggactggacaatgaaatccccaccctattcattgca
gaggtggtgctcacctacatggaaaacagcaggtcagatgccttgattcaatgggcagca
gagcgtttccctcgggcctgcttcctgctgtatgagcaggtgcacccagaggaccccttt
ggacgtgtcatgcagcagcatttcagccagctgaactctgcacttcactctctgacacag
taccctgactgtgaggcacagcagaggcgctttttgggaaggggctggactgagtgcagt
gtcatggatatgaatgagtttttcacctgctgtattccagaagacgaacagcaaagagtg
caggctctggagccttttgatgagtatgaggattggcatctgaaatgttctcattacttt
gtgttgactgcatcaaaggggatggatccttcctggactccgttgttacccagtgtgaca
gttcctcaccatgctggtcctgttggaatggctgggagcatccctgcagcagtgtgtgca
aggctctcgggaattcctggcctgagacgttacggtcactgctctgttcttataaaaccc
gatgtgattctcaccactggaggctttggggaggaggatggacaacactgccgcctgaga
aatttccatgtgctgagtaagcatgcaggctgctggaaagctgactgtgtgacaaagaaa
catcctgataaaagatggggtgagcggttgtatcacactgtgtcctgtgtctcagacagt
ctggccctggtggtaggaggacgaatgtccccatcaagtgcaggcttgggaatgttgtgg
ctaaagttccctgaaacctataatgcttcagacccagatgacattgcagtggagcttgta
aatccgcagcctgctgctgaaccagcaactttgcgttggagacacagcacaactgaagtg
tcattcaaaggtgagcagtacctgtttgtgtatgggggccgctctgctctggagcctgtg
cttggggattggtattttctgcacactcgagaactctccagcactctgattgctgttgag
ggtccagtcccagaaagccgccactctcacagtgcctgcagctgggaaggaggagtgctc
atcgcgggaggtctgggagcagctgagcagcccttgggttcagttttccttctgagggag
cttgaacatggctttcggtggcaggcagtagagacacaccctcctctcatcccaaggtat
tcacatactgcacatgtgcatgaaggaaagcttctgctcgttggtggagtgtggtttcac
acatcctctgtgcctggcatcactgtcattgacctaatgactggcctctgcttggactat
gtgattaatgtggagcatctggagtggccattaatgctacataatcatagcagtgtcttt
ctgccaaatgagaaggagttgttggttattggtggtggtgggaactgcttctcctttggg
acacacctgaacccagagcctgtctcattgagccttgacagcatcctgaccagtcactga
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