Empidonax traillii (willow flycatcher): 114070204
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Entry
114070204 CDS
T05887
Symbol
MEX3C
Name
(RefSeq) RNA-binding E3 ubiquitin-protein ligase MEX3C
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114070204 (MEX3C)
04121 Ubiquitin system [BR:
etl04121
]
114070204 (MEX3C)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114070204 (MEX3C)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114070204 (MEX3C)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114070204 (MEX3C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
zf-C3HC4_3
KH_Vigilin
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4
KH_DEAH11_2nd
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
114070204
NCBI-ProteinID:
XP_027763250
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MMAAMLSHAYDGGGAVGLSDEQTVLLRRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALR
TKTNTYIKTPVRGEEPIFVVTGRKEDVTMAKREILSAAEHFSMIRASHNKNGPALGGLPC
TLNLPGQMTVQVRVPYHIVGLVVGPKGATIKRIQQQTHTYIVTPSRDMEPVFEVMGMPEN
VDRAREEIEMHIAMRTGSYIKLNEESDFHYNGTDVRFEGGTLSSAWLASNPVPPSHTRMI
SNYMNDSSSSLRSGSTDSYFGSNSLADFSPTSPFSTGNFWFGETLPSVSTEDLAVDSPVY
DSLPTPSQTIWTPFEPVNPLSGFGSDSVSNAKPQRQGSRPSTPRLSPTFPESLDHPLSRR
VRSDPPSADHQTGLPIYIPAFSNGTNSYSSSNGGSTSSSPPESRQKQDCVICFESEVIAA
LVPCGHNLFCLECANKICEKDTPLCPVCQTAVTQSIQIHS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcaatgctgtcccacgcttacgacggcggcggcgcagtgggcctcagtgac
gagcagacggtactgctccgccgaaagagcgtcaacaccaccgagtgcgtgcccgtgcca
agctctgagcatgtggccgagatcgtgggccgccagggttgcaaaataaaagcactaagg
accaagacaaatacttacattaagacccctgttcgtggagaagaacccatctttgttgtc
actggacgaaaagaggatgtaaccatggccaaaagggaaattctctcagctgctgaacac
ttctctatgatcagagcatcgcacaacaagaacggtcctgccctgggaggcctaccatgt
acccttaacctgccaggtcagatgacagtccaagtcagggtgccttaccacatagttggg
ctggtggttggaccaaaaggagctacaatcaaaagaattcagcaacagacccatacctac
atagtcacccccagcagggacatggaaccagtcttcgaagtcatgggaatgcctgaaaat
gttgaccgtgcacgtgaggagatagagatgcatatagccatgcgtactgggagctacatc
aagctgaatgaagagagtgatttccactacaatggtacagatgtgaggtttgaaggaggc
actctcagttctgcatggcttgcttctaaccctgtccctcctagccacaccagaatgatt
tctaattacatgaatgacagttccagctccttgagaagtggctccacagattcctatttt
ggaagcaatagcttggctgacttcagcccaacgagtcctttcagcacaggcaacttttgg
tttggagaaacactgccttcagtaagcacagaagaccttgcggttgactctcctgtgtac
gactccttaccaacgccttcccaaaccatttggactccttttgaacctgtaaaccctctc
tctggctttggtagtgactctgttagtaatgccaagcctcaacgccaagggagccggcca
tctactcctcgcttgtcacccacatttccagaaagcctggatcacccactgtctaggaga
gtgaggagtgacccacctagcgctgaccaccaaacaggccttcccatctacattcctgca
ttctccaatggcaccaacagctattcatcttccaatggtggctccacgtccagctcgcct
cctgagtcgagacagaagcaggactgcgtgatctgctttgagagtgaagtaattgcagcc
ctggtcccctgtggccacaatctcttctgtctggagtgtgccaacaaaatctgtgaaaag
gatacaccattgtgtcctgtttgccagacagctgttactcagtcaattcaaatccactct
taa
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