Empidonax traillii (willow flycatcher): 114070261
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Entry
114070261 CDS
T05887
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114070261 (PKD1L2)
04091 Lectins [BR:
etl04091
]
114070261 (PKD1L2)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114070261 (PKD1L2)
Lectins [BR:
etl04091
]
C-Type lectins
Others
114070261 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Lectin_C
Ion_trans
GPS
PKD
CbiD
AGA2
Motif
Other DBs
NCBI-GeneID:
114070261
NCBI-ProteinID:
XP_027763379
LinkDB
All DBs
Position
Unknown
AA seq
2529 aa
AA seq
DB search
MTSQACEEGSKRSGGVVSRTRATQGTELGMWLGVAVLIALAGGLAGEEGIDDEGTDDEGT
PCSKYQQAFNHSCYEFVRLQQTFTSAQSWCERGGGHLVFIQNEETQEFLQKHIAEEQEWW
IGLISNSSPNETTHGSMIWLDTSNVSYTNWYKDQPSSISPTCGYILKNAKYQWGVTENCS
QEFDFICEFESGQSIACDNYNATVQCGSGEVIEIGESFYGRRTPHYCVSDTPLQEDTDES
CSWSSVKDEVAGQCHGLQACQVTADGTFFGDPCPAWGSYLSIQYHCREGLQLVVTDTCFV
SENVTVSLNWLLSPYSGNLSCTISTGDGHTIDPYYPPTLVSNITHRYSSPGEFTVFVECS
TSEWHVMAQRQVTVQDKMDQLSITGCYSQHGAGSSSPCQALYGEVLWIQVELNGGSGVTY
TMVADNITLAESSAKEGIAPHNLTLDSASQELLGPGTHQLEIRASSSTTASEISETLAVH
LVEPISGLQAVLASHTLQVGDNMEVNVSVHRGAPDEVTVEVTGSNETRCHTEDGPRGEPR
TYLVPTHSEVYPKPDGLVPLLLLSGHLSSPGIFLVKVVAKNAFSNMSLDLGFITVLANSS
HKRDSKEEGSYKTNIPKASDHKREAKIYVRPSRHVDPFTTVTLGWPDNTRNSSFLWSCGA
CWPAWNECVLQQIILTNQSEVQIPPSCLPPPKSAVTVRITVQTHGGEERQDEQCLYVTAK
QELQLQIRCEANCKPVNVSEEVVLSVSGQKDSQAIQYNWYLDNTSQTKSTALPLACGLTG
FXGRTLNLLQSNTSVLRMNSSFLQTQGEAFQIKVTAVTQRRYGEGLYLVSTVSPPAIPAC
AVSPERGAVLSTFRVSCSAPGVVDPSQSGPNRQLTYCFYLKPNSLLDCSPDPELFPVYLP
LGEEENNFTVHLTITVSNSFGDTVQTNASVKVGPADGMDGNLTLQGMVSEKANTILRDGN
SSMSLFQLYKSVTSVLNQQSQEESFNTSLQTNTRKELRGLMLTTLSAVNVTSVQAALKMS
EVLKEITYRSEELSVSAQVEASNTLKDVSASLLAVNPEDSRDDENLKEAANHLFNAVSNV
LKASAEIRAVNSSVPEADQISVSHQLLSTVENLQSALLFGKAPDGEPTVLTTPSATMYMH
RLQTENMDGTSINISNSSSASFTLPSASSLSVSGLGDETVDIRMVSFAVNPFFSSDTSFD
ISGTVGGLSLTGLDGLVIPVSNLKENIEIMLPRLSATQEDKILLNLGNYSTFQVNVTSDN
TSVVIHLESEHDIPLILYLGYGYRPNETNYDMKTHLFSKKAAGGETNTWVLSPAELIFGE
GTYYFTVLQDVGMDSAVHAGLTVGVTCFASRCVFWDERQGSWNSHGCRVGPKTNPRSTQC
LCNHLTFFGSSFLVIPNAIDVSKTAQLFGTFVENPVVVTTVGCIFLIYVLVVIWARRKDI
QDDAKVKITVLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGVEGESEPHHLTDPD
TPVFERGGVDVFLLCTFFPLGELQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCN
SWLAIDIGECVLDKVFPVATEQDMKQFSNLFFMKTSRGFQDGHIWYSVFSRCPRSSFTRA
QRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSLLMFPINLL
IVQIFRNTRPRPAKQGTEKRPGKNGRVSPGVPPTPEATQAASLTPEAVTKDIRRIANSLF
KALKTPPLTSASDLGKATNINTLLSLVEDVICQQNRAGQGFYDSSKKDGPVIITLGSVDM
REKTRSPTPERRICERPKHGDYNRCLYTQLQQVEMELELLGPHKFQLPQSYTQAVHQVQH
MKSLLEQRMCSWSLSPDFPGDDKKSVSSKGLPWWFVFIGWFLVAATSGVSGFFTMLYGLH
YGKDNSIKWLISMLISFLESLFITQPLKVLGFAAFFALVLKKVEHEDVENPAIDGPLSAP
GDSHPLLGARRDSRSNIYQPPPAADVERMKISCMKEQKAFALIREILAYVGFLWMLLLVA
YGQRDPNSYYLNKHIEDSFTAGFHRVCSYQDFFTWANTTLLKNLYGSYKGFITDGNSKLV
GSARIRQVRVKGDTCPISPRLQHVVEQCHAPYSLHTEDTSVYGEHWNTSAFDNSSDLSSA
WQYQSQSKLRGQPSWGKLAIYSGGGYVIHLGTDPGNASRILQYLFDNVWLDTFTRAVFVE
FTVYNANVNLFCIISLMFESNALGAFFTSAELQSVRLYPYTNSLHLFVVAAEVIYFLFIV
YYMIVQGKLMKSLRWRYFQSKWNLLEMAIILISWSALSVFVKRTILGTRDISYYQEHKEN
SVSFSETARADAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSALRRAWGDISGFLTVI
AIMFLAYSIAANLIFGWKLYSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSC
IIFMTFVVLNLFISVILVAFSEEQKHYQASEEEEIVDLMLMKLFSFFGIKCKKEEKPLTE
GQLEQPVSE
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccaagcttgtgaagaaggcagcaaaaggagtggtggtgtggtaagcaggacg
agagccacgcagggcactgagctgggaatgtggctgggggttgcagttctgattgctctt
gctggaggcttggctggggaggaaggaattgatgatgaaggaactgatgatgaaggaacc
ccctgctcaaagtaccagcaagctttcaaccactcctgctatgagtttgtgaggctccag
caaaccttcacaagtgcccagagctggtgtgagagaggaggagggcaccttgtctttatt
cagaatgaggaaacgcaagagtttttgcaaaaacacattgctgaggagcaggagtggtgg
ataggattgatctcaaactcctcgccaaatgaaactactcacgggtcgatgatttggctg
gacacttcaaatgtgagctacactaactggtacaaggatcagccatcttccatctcaccc
acctgtgggtacatcctgaagaatgccaagtatcagtggggtgtgactgaaaattgcagc
caggaatttgacttcatttgtgagtttgaatctggccagagcattgcctgtgataattac
aatgccactgtacagtgtggatctggagaagttattgagattggagagagcttctatgga
cgaaggacccctcattactgtgtgtctgacactcctctccaagaggacacagatgaaagc
tgcagctggagcagtgtcaaagatgaagtagcaggccagtgtcacggtctccaggcctgc
caggtgacagcagatggcactttctttggggatccttgtccagcttggggaagctatttg
tctattcagtaccactgcagagaaggtctgcagctggtggtgacagatacatgttttgtc
tctgaaaatgtcacggtcagtctgaactggctgctctcaccatattctggcaacctttcc
tgtaccatcagcactggagatggtcacactattgatccttactaccctccaacactggtc
agcaacatcacacacagatactcctctcctggagagttcactgtctttgtggagtgcagc
accagcgaatggcacgtgatggcccagaggcaggtgacagtccaggacaagatggatcaa
ctcagcattactgggtgctacagccagcacggagctgggagcagctctccctgccaggct
ctgtatggggaggtgttgtggattcaggtggaactcaatggaggcagcggagtgacctac
actatggtagcagataacatcaccctggctgaatccagtgccaaggaaggaattgcccct
cacaacctgacactggacagtgcctctcaagagctgctgggcccggggacgcatcagctg
gaaatccgagcgtccagcagcaccacagcctcggagatctccgagactttggccgttcac
ttagtggagccaatatctggtcttcaggctgtgctggcttcccacactctgcaggtgggg
gacaacatggaggtgaatgtctctgtgcatcgaggtgccccggacgaggtgacggttgag
gtgacgggctcgaacgagactcgctgtcacaccgaggatgggcctcgtggggagcctcgc
acctacctcgttcccacccactcggaagtataccccaaacctgatggactggtcccactg
ctactcttaagtggccatttgtcttctccaggtattttcctagtgaaagtggtggccaag
aatgccttctcaaacatgagtctggatcttggattcatcactgtgttggcaaactcttcc
cataaaagagattctaaggaagaaggcagctacaaaacaaatatcccaaaggcaagtgat
cacaaaagagaagccaaaatctatgttagaccgagtcgccacgtggatcctttcacaact
gttacacttggctggccagacaacaccaggaattccagttttctctggtcctgtggagct
tgctggcctgcatggaatgaatgcgtgctgcaacagatcatcctaaccaaccaatctgag
gtgcaaatcccaccttcctgccttcctcctccgaaatcagcagtgactgtcaggattaca
gtccaaacccacggcggtgaagagaggcaggacgagcagtgtctctacgtgactgcaaaa
caagaactgcagctgcaaatcaggtgtgaggcaaactgcaaaccagtgaatgttagtgag
gaagttgttttgagtgtctctggacagaaggactcccaggccatacaatataactggtat
ttggataacacatcccaaaccaagtctacagccctccctctggcctgtggcctgactggt
ttcnncggcagaactctgaatttgcttcaaagcaacacatccgtgttgagaatgaacagc
tccttcttgcagactcagggagaagcttttcagattaaagtaacagcagtgactcagcgc
cgctacggggaggggctgtaccttgtcagcaccgtgtccccgcccgccatccccgcctgt
gccgtgtcacccgagcggggagccgtgctctccaccttcagagtctcctgcagcgctccc
ggcgtggtggatccctcccagagcggtcccaacaggcagctcacctactgcttctatctg
aaaccgaattctctcctggactgcagcccagatcctgaactcttcccagtctatcttcca
cttggagaagaggagaataactttactgtacatctgacaattactgttagcaacagcttt
ggtgacacggttcaaacaaacgcttcagtgaaggttggacctgcagatgggatggatggg
aacctgaccctgcagggcatggtgtctgagaaggcaaacaccatcctgagagatgggaac
agcagcatgagccttttccagctgtacaaatcagtgacatctgtccttaaccagcagagc
caagaggaaagctttaacacgtctttacagacaaacacacgaaaagagctccgagggctg
atgctgacaactctctctgctgttaatgtaacatcagtgcaggctgctcttaagatgtca
gaggtgttgaaagaaatcacttacaggagtgaggagctgtctgtctcagcacaggtggaa
gccagcaacactctgaaagatgtcagtgcttccctgctggctgtgaaccctgaggacagc
agagatgacgagaacttaaaggaagcagccaaccacctgtttaatgcagtgagcaacgtc
cttaaagcttctgcagaaatcagagctgtgaactcttcagtgccagaggcagaccagatt
tcggtgtcacaccagctcctgagtacagtggaaaatctccagagtgccctcctgtttggg
aaagccccggatggtgaacccacagtgctcaccactccttctgccacaatgtacatgcac
agattacaaacagaaaacatggatggcacgtccattaacatctccaattccagctctgcc
agctttactctcccatctgcttcctctctcagtgtttcaggacttggtgatgaaacagtg
gacataaggatggtgagctttgctgtgaatccctttttctccagtgacaccagctttgac
atcagtggaacagtggggggtctaagtcttactggtctggatggcttggtcataccagtc
agcaacctcaaagagaacattgaaatcatgttaccgaggctttcagcaactcaggaagat
aagattctgttgaatctgggcaattacagcactttccaagtcaatgttacctcagataac
acatctgtagtgatccacctggaatctgaacacgacatcccactaatcctctacctgggg
tacggttatcgcccaaatgagactaattatgatatgaaaacccatctgttctctaagaaa
gctgctggaggtgagaccaacacctgggttctcagcccagcagaactcattttcggagaa
gggacctactatttcacggttttgcaagatgtgggaatggattccgcagtccatgccggg
ctaaccgtgggtgtcacttgctttgcatcccgctgtgtattttgggatgagcgccagggg
agctggaacagtcatggatgtcgtgtagggccaaaaacaaatcctagaagcacacagtgc
ctgtgcaaccacctgactttctttgggagctccttcctcgtcatccccaatgccatagat
gtcagcaaaactgcacagctctttggcacatttgtggaaaatcctgtggtggtgacaact
gtaggatgcatctttctgatatatgtgctggtggttatttgggctcgaaggaaagacatc
caggatgatgccaaagtgaaaatcacggtcctggaagacaatgacccctttgctcagtac
cggtacctggtgacagttttcacaggacaccgccgtggggcagccacaacctccaaggtg
actctcaccctctatggagtggaaggagagagtgagccccaccatctaactgatcctgat
acacctgtgtttgaacgtggaggagtggatgttttccttctctgcaccttcttccctctt
ggggaactgcagagtattagactgtggcatgataactcaggggatagtccgtcctggtat
gtgaatcgagtattagtccatgatctggcatgggatcagaaatggtacttcctctgtaac
tcctggctagccattgatattggagaatgtgtcctagataaagtgttcccagtagctaca
gaacaggacatgaagcagttcagcaatctgtttttcatgaagacctccagaggtttccag
gacggccacatctggtactcggttttcagccgctgcccacgcagctccttcacgcgcgcc
cagcgtgtgtcgtgttgcttctcgctgctcctgtgcaccatgctgaccagcatcatgttc
tggggcgtgcccaaggacccagccgagcagaaaatggacctgggtaagatcgagttcacg
tggcaggaagtgatgattggcttggagagctccctcctcatgttccccatcaacctgctc
attgtgcagatcttcaggaacacgcgaccccggccagccaagcagggcacagagaagagg
ccggggaagaatggccgagtgtccccaggcgtaccccccaccccagaggccacccaggcc
gcctcactcactccagaggctgtgacaaaggacataaggagaattgccaactcactcttt
aaagccctgaagactccacctctcacctcagcatcagatcttggaaaagcaacaaacatc
aacacccttctgtcgttggttgaggatgtcatctgccagcagaacagagctgggcaaggg
ttttacgacagcagcaagaaggatggccctgtaatcatcactttaggttctgtggatatg
cgagaaaaaacaagaagcccaactccagagaggagaatctgtgagcgaccgaaacacggt
gattacaatcgctgcttgtatacacaactccagcaggtggagatggagctggagttactg
ggcccccataaattccagctgcctcagagctacacccaagctgttcatcaggttcagcac
atgaagagcctcctggagcagcgaatgtgctcgtggtcccttagtccagacttccctggt
gatgacaagaagagtgtttcttccaaagggctgccctggtggtttgtgttcattgggtgg
ttcctggtggcagccaccagtggtgtgtctgggttcttcaccatgctctatgggctgcac
tacggcaaggacaactccatcaagtggctgatctccatgctcatctccttcttggaaagc
cttttcatcacccagcccttaaaggtgctgggatttgctgctttttttgctctggttctg
aagaaggtggaacatgaggatgtagaaaacccggctattgatgggcctttatctgcacca
ggtgattcacaccctctcttaggagcccgaagggacagtagaagcaacatttaccagcca
cctcccgcagctgatgtggagagaatgaaaatcagctgcatgaaggagcagaaagcattt
gccctcatccgagaaatcctggcctatgttgggtttttgtggatgctgttactggttgcc
tacgggcagagagaccccaactcctactatttgaacaagcacattgaggacagctttaca
gctggattccaccgtgtctgcagttaccaggatttcttcacctgggcaaacaccacctta
ctcaaaaacctttatggatcatataaaggattcatcacggatggcaattccaagctggtg
ggcagtgctcgaatccgccaagtaagagtgaagggagacacctgccctatttctcccaga
ctccagcatgtggttgagcagtgccatgctccctactccctacacacagaagatacatca
gtttatggggaacactggaatacttcagcctttgataactcctctgacctgagctcagcg
tggcagtatcagagccagtccaaactgagagggcagcccagctggggtaaactggccatc
tacagtggagggggatacgtgattcacctgggaacagatcctgggaatgcctccagaatt
ctccagtaccttttcgacaatgtctggctggacaccttcaccagagcagtgtttgttgaa
ttcacagtctacaatgccaacgtgaacctgttctgcatcataagcctgatgtttgagagc
aatgctttaggggccttcttcacaagtgcagagctgcagagtgtccggctttacccctac
accaacagcctccacctctttgtggttgcagcagaagtgatttatttcctctttattgtg
tactacatgatagtgcagggaaaactgatgaagagtctgagatggagatatttccagagc
aagtggaatctcctggagatggccattatactgattagctggagtgctctgtcggtgttt
gtgaagaggacaatccttgggacccgagacatcagttactaccaggaacacaaagagaac
tctgtgagcttcagcgagacagcgagagctgatgcagtccttggctacctgatcgccttc
ctggtgctcctctccacagtgaagctgtggcacctcctcaggctcaaccctaagctaaac
atgatcacctcagcactgaggagggcgtggggggacatctctggattcctcactgtgatt
gcaatcatgttcctggcctattccattgctgcaaacctgatatttggctggaagctctac
tcttacaaaactctctttgattcagcagagaccatggtcagtcttcagctgggaatcttc
aactatgaagaggtcttggactacaatccaattttaggctccttcctaattggatcctgc
atcatttttatgacatttgtggtactgaatctgttcatttcggtgattctggttgctttt
agtgaggagcagaagcactaccaggcttcagaagaagaggagatcgttgatctcatgcta
atgaaactcttcagtttcttcgggattaaatgcaagaaggaagagaagccactcactgag
gggcagctggagcaacctgtcagcgagtga
DBGET
integrated database retrieval system
