KEGG   Empidonax traillii (willow flycatcher): 114070322
Entry
114070322         CDS       T05887                                 
Symbol
DUS3L
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:etl03016]
    114070322 (DUS3L)
Enzymes [BR:etl01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     114070322 (DUS3L)
Transfer RNA biogenesis [BR:etl03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    114070322 (DUS3L)
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 FMN_dh Zn_finger_prot Tim54
Other DBs
NCBI-GeneID: 114070322
NCBI-ProteinID: XP_027763467
LinkDB
Position
Unknown
AA seq 670 aa
MAAAAAAAPGVAPVRARFLTSKEEFHAFLRAGNKPEGQVRDDGEEEKKEEDKEKKEEEEE
QVSSCQSEPPAKRVRAEDPGQDGENQEGAGAEEKERPERKRARGQNKSRPCMKPKHYEQS
RLCPSVTQGSPGKCFFGPRCRFLHDVGEYLAGKPSDLGQRCVLFDTFGRCPYGVTCRFAR
AHLGDGHQNIVNAALAQQWEGKLLVRNNLSKDLQHRLRKRKFVFQKAEEYLRGLKPRGGD
GKGGEATGEQEVSNCAAPQEGLGDGDSHECPVLQEQGGDPEAEALQSPSPRGDGVAPSIP
TVGPLTDEDVTKLRPCEKKKLEIQGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCT
NLLQGQSSEWALLKRHHTEDIFGVQLEGAFPDTMTKCAELLNKTIEVDFVDINVGCPIDL
VYKKGGGCALMTRSNKFEQIVRGMNSVLDVPLTVKIRTGVQEKMNVAHKIIPKIREWGAS
MVTLHGRSREQRYTRSADWEYIAECAKIASPMPLFGNGDILSYEDANRAMEMGVSGIMIA
RGALIKPWLFTEIKEQRHWDISSGERFDILKDFTNYGLEHWGSDTQGVEKTRKFLLEWLS
FLCRYIPVGLLEHLPQRINERPPYYLGRDYLETLMASQNVDDWIKISELLLGPVPPGFTF
LPKHKANSYR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggccgcggcggcggcggcggcgcccggagtggcgccggttcgagcccggttcctcact
tccaaggaggaattccatgccttcctgcgggccgggaacaagccagaaggccaggtgaga
gatgatggtgaggaggagaagaaggaggaggacaaggagaaaaaggaggaggaagaggag
caggtcagcagctgccagagcgagccccccgccaagcgggtgagggcagaggaccctggc
caggatggggagaaccaggaaggtgctggagcggaggagaaggagcgtccggagcggaaa
cgggcccgggggcagaacaagagcaggccgtgtatgaaacccaagcactacgagcagagc
aggctgtgcccctcggtcacacagggcagtccagggaagtgcttcttcggcccccggtgc
cgtttcctccacgacgtgggcgagtacctggcggggaagccctcggacctgggccagcgc
tgcgtcctcttcgacaccttcggccgctgtccctacggggtcacctgtcgcttcgcccgc
gcccacctcggcgacggccaccagaacatcgtcaacgccgccctggcccagcagtgggaa
gggaagctgctggtgaggaacaacctctccaaggacctgcagcaccggctgcgcaagagg
aagttcgtgttccagaaggctgaggagtatctgcgtgggctcaagccccgcggaggggac
gggaagggaggcgaagccacgggggagcaagaggtgtccaactgcgcggctccccaggag
gggctgggggatggggacagccacgagtgcccagtgctgcaggaacagggaggagatccc
gaagcagaggccttgcagagccccagcccccgaggggatggggttgctccctccatccca
accgtgggcccgctgaccgacgaggacgtcacgaagctgcggccgtgcgagaagaagaag
ctggaaatccaaggcaagctctacctggctccactgaccacgtgcgggaacctccctttc
cggcggatttgcaaacgcttcggagcagatgtcacctgtggggagatggctgtgtgcacc
aacctgctccagggccagtcctcggagtgggccctgctcaaacgccaccacaccgaggat
atttttggggtgcagctggagggagccttcccagacaccatgaccaagtgtgcagagctc
ctgaacaagacaattgaggtggattttgtggacatcaacgtggggtgtcccattgacctg
gtctacaagaagggaggaggttgtgctctcatgactcgctccaacaagttcgaacaaatt
gtccgcgggatgaactcggtgctggacgttcccctgacggtgaagatccggactggagtg
caagaaaagatgaatgtggctcacaaaatcatccccaagatccgggagtggggagcatcc
atggtcacgctccatggccgatcccgggagcagcggtacacgcggagcgccgactgggaa
tacatcgccgagtgcgccaagatcgccagccccatgcccctctttggaaatggggatatt
ttatcttacgaagatgcaaatcgagccatggagatgggagtttctggaatcatgattgca
aggggggcactcatcaaaccgtggcttttcactgaaattaaggagcagagacactgggat
atctcctctggggagaggtttgacatcctcaaagacttcaccaactacggcctcgagcac
tgggggtcagacactcagggagtggagaaaaccaggaaattcctgctggaatggctctct
ttcctgtgcaggtacattccagttggattattggaacatctacctcagagaattaacgag
cggccgccgtattacctggggagggactacctggagacactcatggccagccagaacgtg
gatgattggattaaaataagtgagctgctcctgggccctgtccccccaggcttcaccttc
ctgccaaaacacaaggccaattcctacagatag

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