Empidonax traillii (willow flycatcher): 114070477
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Entry
114070477 CDS
T05887
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04140
Autophagy - animal
etl04148
Efferocytosis
etl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114070477
04148 Efferocytosis
114070477
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114070477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114070477
Membrane trafficking [BR:
etl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114070477
Hops complex
114070477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Motif
Other DBs
NCBI-GeneID:
114070477
NCBI-ProteinID:
XP_027763716
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MDCYTANWYPLGEEAFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKAPS
SRPLLEIYSASGLLLASVPWKSGRLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTPVPPVTRCPPGLQQPPACWAVLSQDRVTVVLLAVGPELFLLDN
TSCSSVTPPGLSPSAGPFLHMAVSFNHRLLALFCDSGYIWMGLATLKEKLCEFNSTVRSP
PKQMVWCTRPRSRQRAVVVAWERQLMVVGNSSECIRFVLDEDSHLVPELDGVRILSRTSH
EFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQKADEYLREIREQQLLPEAVGQCI
EAAGYEHEPHTQKSLLRAASFGKCFLDKFPPESFVRMCQDLRVLNAIRDYQIGIPLTFTQ
YKQLTIEVLLDR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggtacccgctgggcgaggaggccttttaccggaagctg
gaactgtactccatggaatgggggctgcgggaggacctgcgggactgtgtggtggccgct
gccccgtacggggggcccatagccctgctgaggaattcccggagggacaaggcccccagc
tcccgcccgctcctggagatctactcggcctcggggctgctcctggccagtgtcccgtgg
aagagcggccgcctggtgcacctgggctggacggcgggggaggacctgctgtgcatccag
gaggacgggactgtgctggtctacaacctgttctgcgagttcaaacggcacttcagcatg
ggaaatgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacgcctgtgccc
cctgtcacacgctgtcccccagggctgcagcagcccccagcgtgctgggctgtgctgtcc
caggacagggtgaccgtggtgctcctggccgtgggaccggagctcttcctgctggacaac
acctcctgctccagtgtgactccccctgggctgagcccctcggcagggccgttcctgcac
atggctgtgtccttcaaccaccggctcctcgccctgttctgcgactctgggtacatctgg
atgggcctggccacgctcaaggagaagctctgcgagttcaacagcaccgtccgctccccc
cccaagcagatggtttggtgcacgcggccccgcagccggcagcgagccgtggtggtggcc
tgggagcggcagctcatggtggtggggaattcctcggagtgcatccgctttgtcctggat
gaggattcccacctggtgcccgagctggacggggtccggatcctgtcccgcacctcccac
gagttcctgcacgagataccagaggccagccaggaaatcttccggattgcctccatggcc
ccgggggctctgctgctggaggcacagaaggagtacgagaaggagagccagaaggccgac
gagtacctgcgggagatccgggagcagcagctgctccccgaggccgtgggccagtgcatc
gaggccgcgggctacgagcacgaaccccacacccagaaatcgctgctgagggcagcttcc
ttcgggaagtgcttcctggacaagttccccccggagagcttcgtgcggatgtgccaggac
ctgcgggtcctcaacgccatccgggactaccagatcggcatcccactcaccttcacccaa
tacaaacaactcaccatcgaggtcctgctggacaggtga
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