Empidonax traillii (willow flycatcher): 114070736
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Entry
114070736 CDS
T05887
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114070736 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114070736 (EXOSC1)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114070736 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114070736 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
114070736
NCBI-ProteinID:
XP_027764102
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MASTARYCIPGERLCSTEEATAGSGTYTRHGFIFSSLAGCLKRRSEDSGLPVVSVVRDSE
SQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTFRGTIRREDIRATEKDKVEVYK
SFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVPISWCEMQCPRTHTK
EFRKVARVQPQFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgcgcggtactgcatccctggtgagcgactgtgcagcacggaggaggcc
acggctggcagtgggacctacacccggcacggcttcatcttctcctcgctggccggctgc
ctgaagcggaggagcgaggacagcgggctgcccgtggtgtcggtggtcagagacagcgag
tcccagctcctgcccaacgtgggggccgtggtgacgtgcaaggtctgcagcattaactct
cgctttgccaaggtgcacatcctgtacgttggctccacgccactgaaatccacctttcgg
gggaccatacggagagaagatatccgagccacagagaaggataaggtagaagtgtacaag
agctttcgccccagtgacatcgtcctggccaaagtcatctccctgggggacgcgcagtcc
aactacctgctgagcacggctgagaacgagctgggtgtggtggtggcacgcagtgaagca
ggggtccagatggtgcccatcagctggtgcgaaatgcagtgcccacggacacacaccaag
gagttccgtaaagtggcccgggtgcagccccagttcctgcagacgtag
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integrated database retrieval system
