Empidonax traillii (willow flycatcher): 114070745 Help Entry 114070745         CDS       T05887                                  Symbol RIF1 Name (RefSeq) telomere-associated protein RIF1   KO K11138   telomere-associated protein RIF1 Organism etl  Empidonax traillii (willow flycatcher) Brite KEGG Orthology (KO) [BR:etl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:etl03032]     114070745 (RIF1) DNA replication proteins [BR:etl03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     114070745 (RIF1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Rif1_N HtaA Motif Other DBs NCBI-GeneID:  114070745 NCBI-ProteinID:  XP_027764113 LinkDB All DBs Position Unknown AA seq 2407 aa AA seqDB search MSAPDTANLSATGTATAALSATDTARAGPSLAPLLHTLQDPAAPPGELTDAHLTIVSRLS GEGGKAFGADVRKHFPQLCKVFKAHIASPNLELSNAALQALGFCTFNSANTAELSAAEMQ DLLSAVNGVAVTSSDKNTRTRALWVISKQAFPPEVVQKEVSSILSTLETILTKGDVQSVV VEYEALNVIIRLMEQSPAQMAEEAVRWAKLIIPLVVHSAHKVQLRGATALEMGMPLFLQK QQEVAAVTEHLMTTKLISELQKLFSAKNETFVLKLWPLFVKLLGKTLHRSGSFINSLLQL EELGFRSGSPVVKKIAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALT KLEVWWYLLVRLGTHLPSNFEQVCVPLIQSTLSVDPAAAFPGTPSRLPANQSLGSATPGQ KAGPYPFGSPATPRINLNSSSAGLVVFPSIQLLGIEMLLHFLMGPGVLDFAKQNKLVLSL EPLPSPLISSSSFFCKHASTLISAVQDGFIAVGKEVPDCMLNVIWKDINGYVKTAIESGN KKEKQGSEILTMLLQALKNTVRSSSLPVQKILSLIDITVKELPPKVLGSPAYQVADMDLL NGTPALFLIQLLFHNNLLECCVTDERFFVILETLVGCALSGPTSPLAFSESVISVINQSS KQVENKEHLWRMWSIVVNPLTEWINQTNEVNQGDALEHNFSAVYSALLLPVSHIFPTQGF PQPSMRSLLRSWAELYRAFARCAALVATAEDNVCCEELGAKVLAGLQGEAPAMFPMMEGL THVVSVMVDCINFAPYGTKYQPKTRSPQTPSDWSKKKKEPLGKVASLFKLLVTLLDSFHL LSPQESCSETLLSVGPSLLAALHTIISHISLPSLLATTLATFAKPLAGFYEQTRLPEVPK VYSNLNNKLEKLLAEILQCLQSHCTGSYDSEMLEQLCPLLCAGFQHRSKQLRNQCAQFWN CTFAKTASLTYPEQLKSVLSQAKKKVPLLLPGFESVEMGEECSGPFSDTMENSQLDAKIS GMEVKLGQKRGSMLAHVSDQKTEGKDKSSNVHVTPAKLKLEFSSSKTPSEILLEEEKSAD FVFIPPETKARVLTEHQKEVLRSKRVDIPAMYNNLDASQDTTLFSQYTQSQEDSLEASPL TENAKEDAESKPQEENARSEGCPSGESSAPTSEGESQSSTAQLIAEEPSAGEQLETSSVE AASKESSAGNENTSNVSNSSASSDVISGTPQPVSRRQSFITLEKFSGAESRPFSPSALTP FSELAGGAALAAKQDQGGARAEKPAEENKKPSKPEPEPVLAAIRRLTRRQSKMELQGNKS KVLNRSEQESLASDSMESTAELCSTVEDVEHILLSQSQALHSTDADIRKVEDTIAEIERA RALDMDAKENTPPDTSTVSPDQATGEDTQVPQVSPQQKVLRRSLRRRSETAESPSGSQDK EDGIQRRDRRKEDDKAGQKKGAQPKDDGSQKQKAGRTAENTSTKESRQAGRAAEEWSSKG SPASRGIDGEGSRSGRRAEEPLKAEGEGQDSNLKVMERPRYHTRRCAQGLLSSIENSEAE GSAKEESTRKKKHSKAKTRSDSLENKLKDGQPGSHSQEVSSQGNETKSPNKEEAEVSTAE PCGLENQGVPPTAGEAVGSASSGNPPAAQNSSEEQKQSDTGMESLPSPSVPEQDGTAAQQ KQEEEKQPSPGGCCAPAADPSSLQTPECHSKRSKRAKKNKSCDCCFKKPKQQITSLTESR KRKTPELDEPQSPPAQTPAGDSKLCEHSDLEESFSLPPCAMSTPVHPPQEPSTGDLESQG MSVDKLQGSSVEMEVEPGSPECSAGETGDFIEEMREPAHQKEPTEQVLSERVPGQPGESC LAMESQGEGAAAPGKDGTATPEKERTVAPEREGPAAPEEEETTASEKELSMAPEKEEPAT PGKDGTATPEKERTMAPEREGPAAPEKELVMAPEQEEPAAPENDVPATPEKEEPAAPEKE LITAPEKEEPAAPEQEEISQNGQLEEMPEELPVGSKPEEKEISNLKGNQDDEGEAEDTTG ETCVIPEKEMKEELIEPDITTPENVALEDPSVESPLKAGGDSLVLVNESPTSIQARCTWS PSASPSTSILKRGAKRSHQDDDSLSPAHKIRRVSFADPIHQAGLADDIDRRSPVVRSHSS PSSRSLKILSNIQTKHITTPTKGFLSPGSRTLKFKSSKKCLITEMAKEPLPCPVEHVYPA LAGCKAPVDVILPQLTSNICARGLGQLIRAKNIKTVGDLSCLTALEIKTLPIRSPKVSNL KRALKGYHEQQVKSRVLEEMVVLEDAEKPVNDVEDKPLCADEEKLGTDLAEPAVPTASEQ PPADLLSQIQALSAQLSSQDLHSYSGSQLFEMQEKLAGMSTCILRNLQSRWKSPPPDSSQ ELLPGAQ NT seq 7224 nt NT seq  +upstreamnt  +downstreamnt atgagcgctccggacaccgccaacctgagcgccaccggcaccgccaccgccgccctgagc gccaccgacaccgcccgcgccggccccagcctcgccccgctgctgcacaccctgcaggac cccgccgccccgccgggagagctcacggacgcgcacctcaccatcgtcagtcgcctgagt ggtgaaggaggcaaagcattcggtgcagatgtcagaaaacactttcctcaactctgcaag gtgtttaaggcacacattgccagcccaaacttggagctcagtaatgcagcactgcaggcc ttgggattctgcacttttaattcagctaatacagctgaattatctgccgctgaaatgcag gacttgctgtcggcggtgaatggcgtggctgtgacatcgtcggacaaaaacactcgcact cgggcactttgggtcatctctaagcaggcctttcctcctgaagttgtccaaaaggaggtg tccagtattctgtccaccctggaaacaatccttaccaaaggggatgtgcagtctgttgtg gttgaatatgaagcacttaatgtcatcatacgcctgatggagcaaagcccagcccagatg gcagaggaggctgtgaggtgggcgaagctcatcatccctctggttgtccactcggctcac aaggtgcagctgcgaggggccactgccctggagatgggaatgccactgttcctgcagaaa cagcaggaggtggcagctgtcaccgagcacctcatgaccacaaagttgatctctgagctg cagaaattgttctccgccaaaaacgagaccttcgtgctgaagttgtggccgctgttcgtc aaactgcttggaaagactcttcatcgtagcgggagtttcatcaactccctcctgcagctg gaggaactcggctttcggagtggctccccagtggtaaagaaaattgccttcattgcatgg aagagcctcatagataattttgctctcaacccagatatcctgtgcagtgctaagaggctg aagctgctgatgcagcccctgagctccatccacgtgagaacagaggctctggccctcacc aagctggaggtctggtggtatttactggtgaggctgggaactcacctgccctcaaacttt gaacaggtctgtgtcccgttaatccaaagcactctgagcgtggatcctgctgctgcattc ccaggaaccccctcccgcctcccggccaaccagagcttgggctcagccacccctgggcag aaagcaggtccttacccatttgggagtccagccacacccaggataaacctgaattccagc tcggcagggctggtggtgttcccttccatccagctgctgggcatcgaaatgctgctgcac ttcttgatgggaccaggagttttagactttgccaagcagaacaaacttgtgctcagttta gagcctctgccgtccccactgatcagcagctcttcttttttctgtaagcatgccagcact ctcatcagtgcagtgcaggatggcttcattgcagttggaaaagaagttcctgattgtatg ctgaatgttatatggaaggacataaatggatatgtaaaaacagcaattgaatcaggaaat aagaaagagaagcaagggtcagaaattctgactatgctgctccaggccttaaaaaacact gtgaggtcgagctctcttcctgtgcagaaaatcctgtccctcattgatatcactgttaag gagttgcctccaaaagtgttgggatctccagcttaccaggttgctgatatggatctttta aatggaacaccagctttgttcctaatccagctgcttttccataacaacctcctggaatgc tgtgtaacagatgagagattctttgtgattctggaaacacttgtgggttgtgccctgtct ggccccacatctcccctggctttcagtgagtctgtgatcagtgtcatcaaccagagctcc aagcaggtggagaacaaggagcatctctggaggatgtggagcattgttgtgaatccactg acagaatggattaatcagaccaacgaagtgaaccagggggatgccctggaacacaacttc agtgctgtgtacagtgcattgctgctgccagtgtcacacatcttccccactcagggcttt ccccagcccagcatgaggtcgctgctgcgctcgtgggccgagctgtaccgcgccttcgcc cgctgtgccgccctggtggccacggccgaggacaacgtgtgctgtgaggagctgggtgcc aaggtgctggctgggctccaaggtgaagctccagcaatgtttcccatgatggaaggactc acccacgttgtgtcagtcatggttgactgcatcaactttgctccatatggtaccaaatac cagccaaaaaccagatctccacagacaccttcagattggtccaagaagaagaaggagccc ctgggcaaagttgcctctctgttcaagctgctggtgacgttgctggactcgttccacctg ctcagcccccaggaaagctgctcagaaactctgctctccgtggggccctcgctcctggct gccctccacaccatcatcagccacatctccctgccctcactgctggccaccaccctggcc acctttgccaaacccctggcggggttttatgaacagaccaggctccccgaggtgcccaaa gtctacagcaacctcaacaacaagcttgagaagctgctggcagagatcctgcagtgtctg cagtcccactgcacgggctcctacgacagtgagatgctggagcagctctgccctctgctc tgtgcagggttccagcacaggagcaaacagctcaggaaccagtgtgcccagttctggaac tgcacctttgccaagactgcctcactcacgtaccctgagcagttaaaatctgtgttaagc caagccaaaaagaaagttcctctcctgctgcctggctttgagagcgttgagatgggtgaa gaatgcagtgggcccttctctgacacgatggagaactcccagctggatgcaaagatcagt gggatggaagtgaagctgggtcagaaacgaggttccatgttggcacacgtgagtgaccag aagactgagggaaaagacaagtccagcaatgtgcacgtaacacctgcaaagttaaaactg gaattttcatcttcaaagactccaagtgagatacttctggaagaggagaaatcagctgat tttgtctttattcctccagaaacaaaagcaagagtattgacagagcatcagaaagaagtg ctgaggtcaaagagggttgatattcctgccatgtacaacaatttggatgcatcacaggac accaccttattttctcagtatactcaaagccaggaggactctttggaagcatcgccttta acagaaaatgccaaagaagatgctgaaagcaaacctcaggaagaaaatgcaaggagtgaa gggtgtccctcaggggagagctcagctcccaccagcgagggggagtcccagagcagcaca gcccagctgattgcagaggagccatcagctggagagcagttagagacaagctctgtggaa gcagcttccaaggagagctcggcagggaacgaaaacacttccaacgtcagcaacagctca gcttccagtgacgtcatttctggcaccccccagcccgtgagccgccggcaatccttcatc accctggagaagttcagcggggcagagagcaggcccttcagcccctcagccctcaccccc ttctcagagctggctgggggtgctgccctggcagccaagcaggaccagggcggtgccaga gcagagaaacctgcagaggaaaacaagaaaccttcgaagccagagcccgagcccgtgctc gccgccatccgcaggctcacgcgccgccagagcaagatggagctccaggggaataagtcc aaggtgctgaacaggtcagaacaggagtctctggcctctgacagcatggaaagcactgct gagctgtgctccactgtggaggacgtggagcacatcctgctgtcccagtcgcaggcgctg cactccacggacgccgacatcaggaaggtcgaggacaccatcgcggagatagagagagcc cgtgccttggacatggatgccaaggaaaacacccccccagacaccagcaccgtctcccct gaccaggccacgggtgaggacacccaggtgccgcaggtgtcccctcagcagaaggtgctg cggcgttccctgaggcgccgctcggagactgcggagagcccctcggggagccaggacaag gaggatgggatccaaaggagggacaggaggaaagaggatgacaaagctgggcagaagaag ggggcccagcctaaggatgatggatcccaaaagcagaaggctgggagaacagcagaaaac acaagtacaaaagaaagcaggcaagccgggagagctgcagaggagtggagctccaagggc tctcctgcttccaggggcattgatggggaagggagcaggagtggcaggagggcagaagag cccctgaaggctgagggggaaggtcaggacagcaacctgaaggtgatggagcgcccacgg taccacaccaggagatgtgcccagggattgctctccagcatagagaactcagaggctgag ggttctgccaaggaggaaagcacaaggaagaaaaaacacagcaaagcgaaaaccagaagt gattctctggaaaataaattgaaagatgggcagccaggaagccacagccaggaggtgtct tcccagggaaatgaaactaagagtccaaataaagaggaagctgaagtcagcacagctgaa ccgtgtggccttgaaaaccagggagttcctcccactgctggtgaagctgtgggatctgcc agctctgggaatccacctgctgctcagaacagcagtgaggagcaaaagcagagtgacaca gggatggagtcactgcccagcccctctgtgcctgagcaggacgggacagcagcacagcag aagcaggaggaggagaagcagccaagcccaggggggtgctgtgctccagcagcagatcct tcctctctgcagacacctgagtgtcacagcaagaggagcaagagggccaaaaaaaacaag agctgtgactgctgctttaaaaagccgaagcaacaaatcacatcactgactgagtccagg aagaggaaaactccagagctggacgagccccagagccccccggctcagacacctgcaggg gactcaaagctgtgtgagcactcggatttggaggaaagcttctccctgcccccctgtgcc atgagcactccagtgcatcccccacaggagcccagcacaggtgacctggaaagccaggga atgtctgtggataagctgcaaggaagcagtgttgagatggaggtggagccagggagtcca gagtgctcagcaggggaaaccggtgacttcatagaggagatgagggaacctgctcatcag aaggagccaacggagcaggttctgtcagagcgggttccagggcagcctggggagagctgc ctggccatggagagccaaggggagggagcagcagctccaggaaaggatggaacagcaact ccagagaaagaaagaacagtggctccagaaagggagggaccagcggctccagaggaggag gaaacaacagcttcagaaaaggaactatcgatggctccagagaaggaggagccagcaact ccaggaaaggatggaacagcaactccagagaaagaaagaacaatggctccagaaagggag ggaccagcagctccagaaaaggaactcgttatggctccagagcaggaggaaccagcagct ccagaaaacgatgtaccagcaaccccagagaaggaggaaccagcagctccagagaaggaa ttaattacagctccagagaaggaggaaccagcagctccagagcaggaagaaataagtcag aatggacagctggaggagatgcctgaggaactgcctgttggtagcaaacctgaggagaag gagatcagcaatctaaagggcaatcaggatgatgaaggagaagctgaggataccacagga gaaacctgtgttattccagagaaagagatgaaggaggaattaatagaacctgatataaca acgcctgaaaacgtggccttggaagatcccagtgtggagtcacctctgaaggcaggtggt gattctctggtgctggtgaacgagagccccaccagcatccaggcccgctgcacgtggtct ccctcagcttccccttccaccagcattctgaagagaggggccaaaaggagccaccaggat gatgattccctgtcacctgctcacaagatccgtcgggtgtcctttgcagatcccattcac caggcggggctggcggacgacatcgacaggaggagtcccgtggtcagatcccactcctcc ccctcttccaggagcctgaaaatcctctccaatattcagactaagcacattaccactcca accaaaggatttctgtccccaggatcccgtacccttaaatttaagagctcaaagaagtgt ttaatcacagaaatggccaaggagcctctgccgtgccctgtggaacacgtgtacccagcc ctggctggctgcaaagctcctgttgatgtcatcttaccccagctcacatctaacatctgt gccagaggtttggggcagctcatccgagccaagaacatcaagaccgtgggggacctgagc tgtctgacagccctggagatcaaaaccctccccatccgctctcccaaagtctccaatctc aaaagagccctcaagggataccatgagcaacaggtgaagtctcgagtgctggaggaaatg gtggtgcttgaagatgctgaaaagcctgtaaatgatgtggaggacaaaccactctgtgca gatgaagaaaagcttggaacagacctggccgagccggccgtgcccacggcgagcgagcag cccccggcagatctcctgagccagatccaggccctctctgcccagctcagctcccaggat ctccacagctattctgggagccagctcttcgagatgcaggagaaacttgctggcatgtcc acctgcatcctgagaaacctgcagtcccgctggaaatcaccaccccccgacagctcccag gagctgcttcccggggctcagtaa

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