Empidonax traillii (willow flycatcher): 114071102
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Entry
114071102 CDS
T05887
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
etl01002
]
114071102 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114071102 (USP48)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114071102 (USP48)
Peptidases and inhibitors [BR:
etl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114071102 (USP48)
Ubiquitin system [BR:
etl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114071102 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
114071102
NCBI-ProteinID:
XP_027764588
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MAPRLQLEKAAWRWTETVPPEAVAQEHIEAAYRVRLEPCQRGACRRNCRGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSACSDGVPKDTDYEPQSICEHLQYLFALLQNSKRRYIDPSAFVKALGLDTAQQQDAQEF
SKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQG
HKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQT
GHKKKLNTYIGFSELLDMEPFMEQKNGVYVYELSAVLIHRGVSAYSGHYIAHVKDPQTGE
WYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQAREK
SLTVEVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEAGSP
YDFISLEWLQKWLDESTPPKPIDNTACLCSHGKLHPDKISLMKRISEYVADFFYRRYGGG
PRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKVTVKGNDGFWVGKASLRSWRQL
ALEQLNEQDEDAEHSNGKMNGNAQNKDESNEEKREEEEELNFNEDIVCPHGDLCISENER
RVVSKEAWEKLKQYFPKAPEFPNNKECCSQCKILEREGEENEALHKMMASEQKTSLQNLF
HDKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSIANSVLLCPHGGLMFT
FASMTKEDSKHIALIWPSEWERIQKLFVVDHVIKITRTQGPEGSRYTSEPQLCPECREGL
LCQQQRDLREYTQATVYVHKVVDNKKVMKDAAPELNVSSSEAEEEREENKPEGEQDPDFN
QANGGTKRQKLSQQSYITYQKQGIRRSTRHRKVRGEKALLVSANQTLKELKIQIMHAFSV
APFDQNLSIDGKILSDDTATLGSLGVIPESVILLKADEPIADYAAMDDVMQVCMPEEGFK
GTGLLGH
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcggctgcagctggagaaggcggcgtggcgctggaccgagacggtgccgccc
gaggcggtggcgcaggagcacatcgaggcggcctatcgcgtccggctggagccctgccag
cgcggagcctgccggaggaactgccgggggaaccccaactgcctggtgggcatcggggag
cacgtgtggctgggtgagatcgacgagaacagcttccacaacatcgacgaccccaactgc
gagcgccgcaagaagaacgccttcgtgggcctgaccaacctgggggccacgtgctacgtg
aacaccttcctgcagatgtggttcctgaacctggagctgcgccaggcactctacctgtgc
cccagcgcctgcagcgacggcgtccccaaggacacagactacgagccccagagtatctgt
gagcacctgcagtacctgtttgcgctgctgcagaacagcaaacggcgctacatcgacccc
tcggccttcgtcaaggccctggggctggacacggcccagcagcaggatgcccaggagttt
tccaagctgttcatgtccctgctggaagatactttatccaaacagaagaacccagatgtc
aggaacatcgtgcagaagcagttctgtggagagtatgcctatgtcactgtctgcaaccag
tgtggcagagaatccaaactggtgtccaaattttacgagctggagttaaacatccaagga
cacaagcagctgacagactgtataacagaattcctcaaggaagaaaaattagaaggggac
aatcgttacttttgtgagacttgtcagagcaagcagaatgccacgaggaagatccgcctg
ctcagcctgccctgcaccctcaacctgcagctcatgcgcttcgtgttcgacaggcaaact
ggtcacaagaagaagctgaacacctacatcggcttctcggagctgctggacatggagcct
ttcatggagcagaaaaatggtgtgtacgtgtacgagctgagcgccgtcctcatccaccgc
ggtgtcagcgcctactccggccactacatcgcccacgtcaaggacccgcagacgggcgag
tggtacaagttcaacgacgaggacatcgagaagatggagggcaagaagctgcagctgggc
attgaggaagatctagcggagccgtcgaaatcccagactcggaagcccaagtgtgggaag
ggcacccactgctcccggaatgcctacatgctggtgtacaggctgcaggccagggagaaa
tccctcactgtcgaggtgccagctttcctgcaggagctggtggagagggataactgcaag
tttgaggagtggtgcaacgagatggccgagatgcgcaagcagagcgtggccagggggaag
atcaaacacgaggaggtgaaggagctctaccaaaggttacccgccgaagctggttccccc
tacgacttcatctctctggaatggctgcagaaatggctggatgagtccactcctcccaaa
cctatcgacaacacggcctgcctgtgctcccatggcaaactccatcccgataaaatatcc
ctgatgaagaggatttcggaatacgtggccgacttcttctaccggcgctacgggggaggg
ccccggctcaacgtcaaagcactttgcaaggactgtgtggtggaaaggtgtcgaatcctg
cggctcaaaaaccagctgaacgaagactacaaaactgtgaccaacctgctgaaggtcacg
gtcaaggggaacgacgggttttgggttggaaaagcctctttgaggagctggcgtcagctg
gctctggagcagctgaacgagcaagatgaagatgcagagcacagtaacggcaaaatgaat
ggaaatgcacaaaacaaagatgaatcaaacgaagagaagagggaggaggaagaggagtta
aattttaatgaagacatcgtttgcccacacggtgacctgtgcatctccgagaacgagcgc
agggtggtttccaaggaagcctgggagaagctcaagcagtatttccccaaagcccccgaa
ttcccaaacaacaaagagtgctgttcccagtgcaagattctggagcgtgaaggggaggaa
aacgaagctctgcataagatgatggccagtgagcagaagacttctctccagaacctgttc
catgataaatgcaggccttgcctgggcagttggcctcaggagacagatgagctgtatatt
gtttcgcagttctttgtagaagaatggaggaaatttgtcaggaggccgacgcgctgcagc
cccgtgtcctccatagccaacagtgtcctgctctgcccccacggggggctcatgttcacc
ttcgcttccatgaccaaagaagactccaaacatatagctctgatatggcccagcgagtgg
gagaggatccaaaagctcttcgtggtggatcacgtcatcaagatcacccggacgcagggg
cccgagggcagccgctacacctcagagccccagctgtgcccggagtgccgggaagggctc
ctgtgccagcagcagcgggacctgcgcgagtacacccaggccacggtgtacgtgcacaag
gtggtggataacaaaaaggtgatgaaggacgcggctccggagctgaacgtgagcagctcg
gaggctgaagaggaaagggaggaaaacaagccagagggggagcaggatcccgattttaac
caggccaacggcggcacgaaacgccagaagctgtcccagcagagctacatcacctaccaa
aaacagggaatcaggaggagcacccggcacaggaaggtccgaggggagaaggccctgctg
gtgtcggccaaccagaccctgaaagagctaaaaatacagatcatgcacgccttctccgtg
gcccccttcgaccagaacctgtccatcgacggcaagatcctgagcgacgacacagccacg
ctgggcagcctgggcgtcatccccgagtccgtcatcctgctcaaggctgatgagcccatc
gcggattacgcggcgatggacgacgttatgcaagtttgtatgcctgaagagggatttaaa
gggactggtttactcggccactga
DBGET
integrated database retrieval system
