Empidonax traillii (willow flycatcher): 114071329
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Entry
114071329 CDS
T05887
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl00260
Glycine, serine and threonine metabolism
etl00630
Glyoxylate and dicarboxylate metabolism
etl00670
One carbon pool by folate
etl01100
Metabolic pathways
etl01200
Carbon metabolism
etl01230
Biosynthesis of amino acids
etl01240
Biosynthesis of cofactors
etl04981
Folate transport and metabolism
Module
etl_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
114071329 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
114071329 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
114071329 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
114071329 (SHMT2)
Enzymes [BR:
etl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
114071329 (SHMT2)
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Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
114071329
NCBI-ProteinID:
XP_027764942
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Position
Unknown
AA seq
500 aa
AA seq
DB search
MWPLRLGRTLQRWGGRVGPGSQRAQHGSAAAATRQVPGWTGQESLAESDPEIWSLVQKEK
DRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRAL
EAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRIS
ATSIFFESMPYKLDPATGLIDYDQLEVTARLFRPRLLIAGTSAYARLIDYARMKKVCEEV
KAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKTG
KETLYDLEDRINFSVFPSLQGGPHNHAIAAVAVALKQASSPAFREYCQQVLRNAKAMAQA
LLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGL
RLGAPALTSRHFREEDFQKVVEFIDEGIMLALDVKSKTSKLQDFKTFLLQDPETQRRLRD
LRQRVETFARAFPMPGFSDH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcaggaccctgcagcgatgggggggccgggtgggccccggc
agccagcgggcacagcacggctccgccgccgccgccaccaggcaggtgcccggctggacg
gggcaggagagcctggccgagagcgaccccgagatctggagcctggtgcagaaggagaag
gatcggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgggcggcg
ctggaagccctgggctcctgcctcaacaacaagtactcggagggctatcctgggaagagg
tactacgggggggccgaggtggtggatcagatcgagctgctgtgcgagcagcgggcgctc
gaggcgttcgacctggaccccgcgcgctggggcgtcaacgtccagccctactcggggtcc
ccggccaacttcgccgcctacacggccctgctgcagccccacgaccgcctgatggggctg
gacctgcccgacgggggccacctcacccacgggtacatgtccgacgtcaagaggatctcg
gccacctccatcttcttcgagtcgatgccctacaagcttgatccggccacggggctgatc
gactacgaccagctggaggtgacggcgcggctcttccgtccgcggctgctcatcgcgggc
accagcgcctacgcccggctcattgactacgcccgcatgaagaaggtgtgcgaggaggtc
aaggcgtacctgctggcggacatggctcacatcagcgggctggtggcggccaaggccatc
ccctcgcccttcgagcacgccgacgtcgtcaccagcaccacccacaagaccctgcgcggc
gccaggtcgggattgatcttctaccgcaagggcgtgcgctccgtggataagaagacgggg
aaggagacgctctacgacctggaggacaggatcaacttctccgtgttcccctccctgcaa
gggggcccccacaaccacgccatcgccgccgtggccgtggccctcaaacaggccagctcc
ccggctttccgggagtactgccagcaggtgctgaggaacgccaaggccatggcccaggcg
ctgctgcagcgtgggtacaccctggtgtcaggtggcaccgacaaccacctggtgctggtg
gatctgcggcccaagggcatcgacggggcgcgggcggagcgggtgctggagctcgtgtcc
atcaccgccaacaagaacacgtgcccgggggacaagagcgccctgaccccgggggggctg
cgcctgggtgcccccgcgctgacctcccgccacttccgcgaggaggatttccagaaggtc
gtggagttcatcgacgagggcatcatgctggccctggacgtcaagagcaaaaccagtaag
ctccaggacttcaagaccttcctgctgcaggaccccgagacgcagcggcgcctgcgcgac
ctccgccagcgcgtcgagaccttcgctcgtgccttccccatgcccggcttcagcgaccac
tga
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