Empidonax traillii (willow flycatcher): 114071402
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Entry
114071402 CDS
T05887
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04010
MAPK signaling pathway
etl04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114071402 (CACNA1B)
04020 Calcium signaling pathway
114071402 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114071402 (CACNA1B)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114071402 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
114071402
NCBI-ProteinID:
XP_027765031
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
KQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRP
LVVEPRSEGRNNISKLSPGDVQEVQEHPKGSSADGAEAPRKHHRHREKEKEKQAEQEKGD
APKEESAEPAVPNKEERHRQHRSRSKEVEGGSKEGKSERNRGQEGGKRHHRRGSVDEGGE
KEHRRHRTHRHSTERQGKDGNGTANGARGERRSRHRGGSRSGNRDGEPKGENGEEPHRRH
RLRNRALSTYESVEKENGEKEAEAAEKEHRNHQPKENQCEIEASGSVSVPVHTLPSTYLQ
KVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAPPGETTVIPMNNVEFESKTEEKK
DVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYFEMVILIVIALSSIALAAED
PVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGAL
VAFAFSSFMGGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILI
VYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKNEVEAQPREWKKYEFH
YDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEMSIFYVVYFVVFPFFF
VNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKMWKF
VVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTSMFSMECVLKIIAFGV
LNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRAARLIKLLRQGYTIRI
LLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDETSINRHNNFRTFLQALML
LFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFYFVSFIFLCSFLMLNLFVA
VIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMYEMLRHMSPPLGLGKK
CPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEI
SLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGGLCQPGP
VSLFHPLKATLEQSQSTAFSNAKAFLRQKSSASLNNGGALPAPEGGIKESSSWGTQRTQD
VFYETRTPAFERGRSEEIPIERVVEMREISPTVANGEPQPGLESQGRAASMPRLAAETQP
IPDTSPMKRSVSTLTPQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDRAA
HHLADGQAAAQAGESSAKDKKERGRSQERKQHSSSSSEKQRFYSCDRYGSRERSQPKSAE
QSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPCRGRRQLPQTPLTPRPSITYKTA
NSSPVHFTTVQPGLPTFSPGRLSRDPPHTPSPALKPQPDDGLGSPPILRQNLKKNLKLSK
SPPAS
NT seq
4519 nt
NT seq
+upstream
nt +downstream
nt
caagcagcagaactcctccaaatccaagtcggtgtgggagcagaggaccagccagatccg
gatgcacaacttccgagccagctgcgaggccctgtacaacgagctggaccccgaggagcg
ggtccgctacgccaccaccctgcacatcaggccggacatgaagacccacctggaccggcc
gctggtggtggagcccaggagcgagggcaggaacaacatcagcaagctgagccctgggga
cgtgcaggaggtgcaggagcaccccaagggcagctccgccgatggggcagaagccccgcg
gaagcaccaccggcaccgggagaaggagaaggagaagcaggccgagcaggagaagggcga
cgcgcccaaggaggagagcgcggagcccgccgtgcccaacaaggaggagcggcaccggca
gcaccggagccgcagcaaggaggtggagggtggcagcaaggaagggaaaagcgagcggaa
cagggggcaggaaggggggaagaggcaccaccggcggggctcggtggacgaaggggggga
gaaggagcaccgcaggcaccgcacgcaccggcactccacggagcgccagggcaaggatgg
caacggcaccgccaacggcgcccgcggagagcggcgctcccggcaccgcggagggtcccg
ctctggcaacagggatggagagcccaagggggagaacggggaggagccccacaggcggca
caggctcaggaacagggccctgtccacctacgagtcggtggagaaggagaacggggagaa
ggaggcggaggctgcggagaaggagcaccggaaccaccagcccaaggagaaccagtgtga
gatcgaggccagtgggagtgtgagtgtccctgtgcacaccctgcccagcacttacctgca
gaaggtgcctgagcagccagaagacgccgacaaccagaagaacgtgacgcggatgattca
accccccctggacaaaaccaccactgtgaacatccccgtcaccatcacggccccaccagg
ggaaaccactgtcataccaatgaacaacgtggagtttgagagcaaaacagaggagaagaa
agacgttgatgacttgacgaaaaatgggcctaaaccaatcttgccttacagttccatgtt
catcctgagccccacaaacccgattcggcggctcttccactacatcgtcaacctgcgcta
cttcgagatggtcatcctgatcgtcatcgccctcagcagcattgccctggctgcagaaga
ccctgtccaagctgagtcacccagaaatgatgctctgaaatacttggattatatatttac
aggtgtctttacctttgagatggtgatcaagatgattgacctggggctgttactccaccc
tggctcctacttccgtgacctgtggaacatcctggacttcattgtggtcagtggggcctt
ggtggcatttgccttctcgagtttcatgggaggaaccaaaggcaaggacatcaacacaat
caagtccctgcgagttctgcgggtcctcaggcctctgaaaaccatcaaacggctgccaaa
actaaaggctgtctttgactgtgtggtgaactccctgaagaacgtcctcaacatcctcat
cgtttacatgctcttcatgttcatttttgccgtcattgctgtgcagctcttcaagggcag
attcttctactgcactgacgagtccaaggagctggagaaggactgcaggggtcagtacct
cgattatgaaaaaaatgaggtggaggcccagcccagggagtggaaaaaatacgagttcca
ctatgacaacgtgctctgggctctgctcacgctcttcaccgtgtccacgggggaagggtg
gccaaccgtgttgaagcactcggtggacgccacctacgaggagcagggtcccagccctgg
ctacaggatggaaatgtccatcttttacgtggtgtattttgttgtcttcccttttttctt
tgtgaacatctttgtggctttaatcatcatcaccttccaagagcaaggagataaagtgat
gtcagagtgcagcctcgagaaaaacgagagggcctgcatagactttgccataagtgccaa
gcccctgacccggtacatgccccagaacaagcaatccttccagtacaagatgtggaaatt
cgtggtgtcccctcccttcgagtattttatcatggtcatgattgccctcaacaccatcgt
cctcatgatgaagttctatgatgctccggaggcatatgaagaaatgctgaaatgcctgaa
tatcgtgtttacatccatgttttccatggaatgtgtgctgaagatcattgcctttggtgt
gctgaattatttccgagatgcctggaatgtctttgattttgtcacagtgttgggaagtat
tactgatattttagtaacagagattgcggacacggacaacttcatcaacctcagcttcct
gaggctcttcagggcagccagactcatcaaactcctccgccagggctacaccatccgaat
cctgctctggacatttgtgcagtcctttaaggccttgccttacgtgtgtctcctcattgc
aatgctcttcttcatctatgccattattggcatgcaggtatttgggaacattgcattaga
cgatgaaacctccattaatcggcacaacaacttccgtaccttcctccaagccctgatgct
tctgttcaggagtgccacgggggaagcctggcacgagatcatgttgtcctgcctgagcaa
cagagcctgtgaccccctctctggcctcaccaagaaggaatgtggcagtgattttgccta
tttctactttgtgtccttcatcttcctctgctccttcctgatgttaaacctgtttgtggc
tgtgatcatggacaactttgagtacctgacgagagactcctccatcctggggccgcacca
cttggacgagttcgtgcgtgtctgggctgagtacgaccccgctgcctgcggtcgcatcag
ttacacagacatgtatgagatgctgagacacatgtccccacctctaggccttggaaagaa
atgccctgctcgtgttgcctataagcgcctggtgaggatgaacatgccgatctcccccga
ggatctgactgtccacttcacatccacgctgatggccctgatcagaacggccctggagat
caaactggcctcaggtggagttaaacagcaccagtgtgatgctgagctgagaaaggagat
ctccctggtttggcccaacctgtcccagaagactctggatctgctggtgcctcctcacaa
acctgatgaaatgactgtggggaaggtctacgcagccctgatgatatttgacttctacaa
gcagaataagaacagcagggaacaagtccagccccctggaggcctctgccagcctggccc
agtgtccctgttccaccccttgaaggccaccctggagcaaagccagtccacagcgttcag
caacgccaaggccttcctgcgccagaagagctcggcctcgctcaacaacgggggtgcact
accagccccagagggtgggatcaaagagtccagttcctgggggacccagcgcacccagga
cgtgttttacgagaccaggacaccagcttttgagcgaggccgctctgaggagatccccat
cgaacgggtggtagaaatgagggaaatcagccccacagttgccaatggagagccccagcc
agggctggagagccagggccgggcggcctccatgccacgcctggctgccgaaactcagcc
catcccggacacgagccccatgaagcgctccgtgtccacgctgaccccgcagcgccctca
cgccatgcacctctacgagtactccctggagaggatgcccccggagcaggggcaccacca
ccaccaccaccgctgccaccggaggaaagagaagaagcagaagtccctggacagggccgc
ccatcacttggctgatggacaggctgcagcccaggctggtgagtcttctgccaaggacaa
gaaggagcgggggcggtcccaggagaggaagcagcactcctcctcctcctccgagaagca
gcgcttctactcctgcgaccgctacggcagccgggagcgctcccagcccaagtctgctga
gcagagcaggcccacctcccccaacggggggccagagcaaggtccacacagacagggcag
tggttcagttaatgggagccccttgctgtcgacatctggtgctagtaccccctgccgggg
tcggaggcagctcccacagactccactgaccccacgccccagcatcacttacaagaccgc
taactcctcgcccgtgcacttcaccactgtccaacccggcctccccaccttctccccggg
acgcctgagccgcgaccccccccatacccccagccctgcactaaaaccacagccagacga
tggccttgggtcacccccaattcttaggcagaacctgaagaagaatctcaagttgtccaa
atccccccctgcctcgtag
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