Empidonax traillii (willow flycatcher): 114072012
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Entry
114072012 CDS
T05887
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114072012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114072012
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-60S particles
RNases
114072012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
114072012
NCBI-ProteinID:
XP_027765723
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MNKYLQCLLSAGSSERGYDPYNPELPRASLETEDGTLTDLTDVTPGILELELVNKAIEAV
KNEVEREQKKYEELLETTKEFGASEGSSLLSNSPVSAAGTQSDSFASLEYNPGSYNFNSN
SDYNPTPLTAAGRSSKYTLDSSRSKGSSLEYIPKAVVQSKKYSSAVTTNKYVIDDSKPST
DLEYDPLSNYSARLLSKATTKEPKGSKRERVADYEDSYSPSQKKLCEDPDDYEVLARFSS
SEDEADVEYKAASGSSPSKAGSESESNELSSKELSTKLDGFASQESREAAQCGREDLPGW
QKNVAKNLPDKSTKALVKPCSGKNSQEAENKNKDSKDKAKRKKPDLSKTPGLGEAGKKEK
SKETEKGKVLKKEEKLKIKSEEKNCKDKSVRAKTEGNLKKPEKQKSEKADGLKKEKSKSS
SSSSSSSSGKSKSEGFPKGCGSEKLGSSGKDSQSRAGDVKNGKEPSGRKNKEKGTKTAGG
ERKKEKVSPAGQGEPKKGRKQRSLSHVDLFGDESGEDDAEGRPLASSRRAPSSDSDGAGS
GSASEGTGERARRAKRSRLSRSSSSSSTSDGIDYSILEKDVDFESDPMEECLRIFNESTD
VKTEDKGRLGKQPSKEEANEEKTEDNLTTLFPGQKRRISHLVKQGNAEAPSKPVVRPYRP
PTAQEVCYQRIQLAQQQAAQLVQKASLSLPGEKRRIAHVPNAALTAAAKQGLGSSKAAVA
GRSVTPSNDSEAPNLPLKACTLAGMASKTTSTVVPKRVAHVPSLQSPSLQRPVIPTEFGA
KVPTNIRQRYLNLFIDECLKFCPSSQEAFDKALSEEKVAYERSTSRNIYLNVAVNTLKKL
RSLVPNSPSSTNSRYHTCGLITVSPAWGRAQGEEGVEEPAPVSQQPQLSFL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatacctgcagtgtttgctgagcgcggggagctcagagcggggatatgatccc
tacaacccagagcttcccagggcctcgctggagacggaggatggcaccctgactgacctg
acagacgtgacccctgggattctggagctggagctggtcaacaaggccattgaggctgtg
aagaacgaggtggagagagagcagaagaaatacgaggagctgctggaaaccaccaaggag
tttggtgcctcagagggctcctccctcctctccaactcgcccgtgtcggctgctgggact
cagagcgattcctttgcctccctggagtacaatccagggagctacaacttcaacagtaac
tcagactacaaccccacccctctcactgctgctggccggtcgagtaaatacactttggac
tcctcccgatccaaagggagctccctggaatacattcccaaggctgtggtacagagtaaa
aaatacagcagcgctgtcaccaccaacaagtacgtgattgatgactccaagccttccaca
gacttggaatacgaccccctttccaattactcagccaggcttttgagcaaagccacgacc
aaggagcccaaggggtccaagagggaaagggtggctgattatgaggattcctactctccc
tcacagaagaagctctgtgaggaccccgatgactacgaggtgttggccaggttctcctcc
tctgaggatgaggctgatgtggagtacaaagcagcttctggtagctcaccatccaaagct
ggctctgagagtgagtcgaacgagctctccagcaaagagctgagcaccaaactggatggc
ttcgcttcccaggagagcagggaagcagcacagtgtggcagggaggacctcccaggctgg
cagaaaaacgtggccaaaaacctgccagacaagagcacaaaggctctggtgaaaccgtgc
tctggtaagaacagccaggaggctgaaaataaaaacaaagactcgaaagacaaagcaaaa
aggaagaaaccagaccttagtaagacaccaggcctcggtgaggccgggaagaaggagaag
agtaaagagacagaaaagggcaaagtgctcaagaaagaggaaaaattgaaaatcaagagc
gaagagaaaaactgcaaagataaaagcgtcagggcgaaaacagaggggaacctgaagaaa
cctgaaaagcagaagtcagaaaaagcagatgggctcaagaaggaaaaatccaagtccagc
agcagcagcagcagcagcagctcaggaaaaagcaagagcgagggtttccccaagggctgc
ggctctgagaagctggggagcagcgggaaggactcccagagcagagcgggggacgtgaaa
aacgggaaggaaccctcgggccggaaaaacaaggagaaagggaccaagaccgcggggggg
gagaggaagaaggaaaaggtcagtcctgcgggccagggggagcccaagaagggccggaag
cagcggagcttgagccacgtggacctgtttggggacgagagcggcgaggacgacgctgag
ggccggcctttggcctcctcccggcgcgccccgagctcagactcggacggggcgggctcg
ggctcggcctcggagggcaccggggagagggcacgcagggccaagcgctcccggctctcc
aggtcctcctcatcctcctccacctccgacggcatcgactattccatcctggagaaggac
gtggacttcgagtcggaccccatggaggagtgcctgcggatcttcaacgagtccaccgat
gtgaagaccgaggacaagggaaggctggggaagcagccatccaaagaggaagcgaacgaa
gaaaagacagaagataatttaactaccttgtttcctggccagaaaagaaggatctcacat
cttgtcaaacagggaaatgcagaggccccgagcaagcccgtggtgaggccctaccgtccc
cccacggcccaggaggtgtgctaccagaggatccagctggctcagcagcaggcagcacag
ctggttcagaaggcctctctctctttgccaggagaaaagaggaggattgcccacgtgcca
aatgccgccctcaccgcagcagccaagcaaggccttgggagcagcaaggcagctgttgct
ggcaggagtgtcacaccttccaatgactctgaagcccccaacctccctctcaaggcttgc
acattagctgggatggcttccaagaccaccagcaccgtcgtgcccaaaagggtcgcccac
gttccctccttgcagagccccagcttacagaggcctgttattcccacagaatttggtgct
aaagtccccacaaacattcgtcagaggtatctcaatctcttcatcgatgagtgcctgaag
ttctgcccctcctcccaggaagcctttgacaaggctctgtcagaagagaaggtggcctac
gaacgcagcaccagtcgcaacatctacctgaacgtggccgtcaacaccttgaagaagctc
aggagccttgtgcccaactccccatccagcaccaacagtaggtaccacacttgtggttta
ataactgtgagccctgcctggggcagagcccagggagaggagggtgtagaagagccagcc
cccgtttctcagcagccccagctcagctttttatag
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