Empidonax traillii (willow flycatcher): 114072929
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Entry
114072929 CDS
T05887
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl02010
ABC transporters
etl04145
Phagosome
etl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114072929
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114072929
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114072929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etl02000
]
114072929
Enzymes [BR:
etl01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
114072929
Transporters [BR:
etl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
114072929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
DUF4453
Motif
Other DBs
NCBI-GeneID:
114072929
NCBI-ProteinID:
XP_027766550
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MALPPSLLLLGALLVADALSLSLLGPLVPALARLGPAGAWLEAALRLPLLAAAPRLLSPL
CPPGATTTAAVATIAVTPAAFTALRSLLGLPGPGPGLLAAAAPAWLGVTHAAAALALLAW
DAPRALGGVPKAPGGVPEVPGGIWRVLALTCSEWKVLGAAFLCLMVAAAAETAGPYVTGK
VLDAVRSGNGLTTGAVGMVVAAEAASVLFSGCRGWLFLLAAARLRQSLRLRLFSHLLHQD
LDFFQGMPAAELSARFSAEVPLVSMAVPRGTNLLLRSLGMALVEGAAMVRLAPGLALLAL
LELPLGITAQRIHSARRRTLVGPWNRGGDTTIGVGPWNRGGDTTIGVGLWNRGRDTKELG
KLTGSGPGQVVLVEQDPILFSGTIRENVVLGLEGCEESELREAAAAAGALEFIQGLEQGW
DTEVGERGGQLAAGERRRLALARALLRRPTVLILDEALDEGDEGAVSGVGT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcctccctccctgctgctcctgggggcactgctggtggccgatgccctgtcc
ctgtccttactgggcccgctggtgccggcgctggcacggctgggcccggcgggtgcgtgg
ctcgaggctgccctgcgcctgcccctcctggctgcagccccccggctcctgtcccctctc
tgtccccccggggccaccaccacggccgccgtggccaccatcgccgtcacccctgcggcc
ttcacggccctgcggagcctcctgggcctgcccggccccgggcccggcctcttggcggct
gcggcacccgcctggctcggggtcacccacgcggccgccgcgctggccctgctggcctgg
gacgctccccgtgccctgggtggtgtccccaaagctcccgggggtgtccccgaggttcct
ggaggcatctggagggtcctggcgctgacctgctccgagtggaaagtcctgggagccgcc
ttcctgtgcctcatggtggcggccgccgcggagacggcggggccttacgtcaccgggaag
gttctggacgccgtccggagtgggaacggactcaccactggagctgtggggatggtggtg
gctgccgaagcagccagtgtcctgttctccgggtgccgcgggtggctcttcctgctggcg
gcggcgcgtctgcggcagagcctgcgcctccggctcttctcccacctgctgcaccaggac
ctggatttcttccagggaatgccagcagccgagctgtcggcgcggttctctgcggaggtg
ccgctggtgtccatggcggtgccgagggggaccaacctgctgctccggagcctgggaatg
gcgctggtggagggtgcggccatggtccggctggcgccggggctggcgctgctggcgctg
ctggagctgcccctcgggatcaccgcccagcgcatccacagcgcccggagacggactctg
gttgggccgtggaacaggggtggggacaccacgattggggttgggccgtggaacaggggt
ggggacaccacgattggcgttgggctgtggaacaggggtagggacaccaaggagctggga
aagctcacgggctcggggccggggcaggtggtgctggtggagcaggatcccatcctgttt
tctggaacaattcgtgagaacgtcgtgctggggctggagggctgtgaggagtcggagctg
cgggaagcggccgctgctgccggagccttggagttcatccaggggctggagcagggctgg
gacaccgaggtgggggagcgcggggggcagctggcggcgggtgagaggcgtcgcctggcc
ctggcccgggccctgctccgccgtcccaccgtcctcatcctcgacgaggcgctggatgag
ggagacgagggcgcggtgagtggggtggggacatga
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