Empidonax traillii (willow flycatcher): 114073199
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Entry
114073199 CDS
T05887
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114073199 (TOPORS)
03036 Chromosome and associated proteins [BR:
etl03036
]
114073199 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etl03037
]
114073199 (TOPORS)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114073199 (TOPORS)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114073199 (TOPORS)
UBL E3 ligases
114073199 (TOPORS)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
114073199 (TOPORS)
Cilium and associated proteins [BR:
etl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114073199 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
114073199
NCBI-ProteinID:
XP_027766823
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MADPTWRLAEGARRRRPPGEERRELPGSGRCRTRHRLKAAAALARAGSEGPAANMTSADK
EFAEDSNFAPKASTSKLPTDASPDSKCPICLDKFDNVAYLDRCLHRFCFRCVQEWSKNKA
ECPLCKQPFFSIFHTIRAEDDFKEYVLSPLENSSFASPDGRRFRYRTTLTRERRNRSSPS
RRMLTPPDNGMLFEGLSSEPVRHRHREIHQMMRRLASRRQASAEGRSLRQIQEEDMISFR
RALYRTGVRIRSIQDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLINIVQ
HIIMSNVTRYDLGSQTFADDLKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANYDCPAP
SYEEGSHSDSSIITISPDVAYSQGPDNSLSVPGLGQAPWDDETPGPSYSISEEVRATIAS
PLESSESSDEHSATGSQRTKLQTQLEANADSNDSDSSSDNCVIVGYVKPLAERTPEVVEL
SSDSEESIREEKREDVKKQRPVQCHSWSDSEQSRSFSPCSPEYKEDAGSCRSCLSPTVEK
TESKEDEKKKCKGKDLPPRDLSWSPSPGSDTVCSPWNHRKGKSRSPQSCSRSSRGSHGHR
SRRERRSKSQLKRRRSRSRDSSKHRSKRSSRRSRAHDNRTSLKSQRGSLSGESTPSREVS
RSRSRSKGHSKRRSRSRDSDRYYVRDSYQSRHQWGSAFCSRKVFGDSYESSSRRRTRSNT
LYSRQSASPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNRSRTPSGGTDRMK
SEKPGGKRKYKTRHLESAFMESTSLERENDPKKTSSKFSDCCKNEDSLSDNRASTETKRK
KRKKKMRSPSVEIVYEGKAVDTTRHLKKKKKKHKKKHRKHHTSNSAHSSPVVITIDSDSS
KEPESTEWDSGVTWTGTTQRNERENESPSSFLRTGCEETGGADKKYNISTTREDSDGDIT
NPDVKLQGTAADQSVTTADTHSNTSHTETVTSYVQEAPAAPSSQLSSPRISFLECPERQP
LILRLPKRLVSRSSWFDFPEEKM
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgacctggcgcctggcggagggcgcccgccgccgccgcccgccgggggag
gagcggcgggagcttcctggctccgggcgctgccggacgcgccacaggctgaaagcggcc
gcggctctggcccgcgcggggagcgagggcccggcggcgaacatgacttcagcagacaaa
gagtttgcagaagacagcaactttgcaccaaaagccagcaccagcaagctgccgacagac
gcatctcctgattccaaatgccccatctgcctggataaatttgacaatgttgcgtatcta
gatcgctgcttgcataggttctgcttccgctgtgtccaggagtggtcaaaaaacaaggca
gaatgccccctgtgcaagcaaccgttcttttccattttccatacaattcgtgctgaagat
gactttaaggagtatgtactcagccctttagaaaatagctcttttgccagccctgatggc
cggagatttcgttatcgtactaccttaacaagggaacgccgcaatcgcagttccccttcc
cgaaggatgctgacccctccagataacgggatgttgtttgaagggttgtcaagcgaacca
gtgcggcacagacaccgagagattcatcagatgatgaggaggctggcctcaaggagacag
gctagcgcggagggcagatccctgcggcagatccaggaggaggacatgatcagcttccgc
agagccctgtaccgtaccggtgtgcgtatccgcagcattcaggacggtggccgctatcga
gacatctcagcagagtttttccgccgcaaccctgcctgccttcaccggttggttccttgg
ttgaagcgagaactgacagtcctatttggtgcccatggatctttgattaatattgtacag
cacataatcatgagtaatgtgactaggtatgatctgggaagtcagacctttgctgatgat
ttaaagccatttttgctgaatcggacagaacacttcctgcatgagttcatcagttttgct
cgttgtccttttaacttagaagcatatgatcaacatgccaattacgattgtcctgcacca
tcgtatgaggaaggaagccattcagactcatcaattattacaatatctccagatgtggca
tattctcaggggccagataacagtttgtctgtgcctggtcttggtcaggccccctgggat
gatgaaactccagggccttcctattccatttcagaagaggttcgtgcaaccatagcttct
cctctggagtcatcagaaagttctgatgaacactctgctacagggagtcaaagaacaaaa
ctgcagactcagttagaggctaatgctgactcaaatgacagtgactcttcctcagacaat
tgtgtcattgttgggtatgtaaagccattagctgagaggacaccggaagtggttgagctg
tcctcagactctgaggagtccatcagggaagagaaaagggaagatgtcaagaagcagcgg
ccagtccagtgtcacagctggagtgacagtgaacaaagcaggagcttctcgccatgttcc
ccagagtataaggaagatgcaggtagttgtagaagctgtttgtctcctacagttgagaag
acagagtcaaaagaggatgagaagaaaaaatgtaagggaaaagatctgcctccacgggac
ttgagctggagtccctctccagggagtgacacagtatgttccccttggaatcacaggaag
ggaaagtccagaagcccacagtcttgttcacggagcagtcgaggcagtcatggccatcgg
tctaggagggagcgccgtagcaaaagccagcttaaaaggagacgatcaagaagcagagat
agcagcaaacacaggagcaaaagaagcagcagaaggtctagggctcatgacaacagaacc
tctctgaaaagccaaaggggctctctaagtggtgagagcactccatccagagaagtaagc
agatcacgatcgcgtagcaaaggccacagtaaaaggagatcaagaagtagagacagtgat
cgctattatgtaagagacagttatcaaagtagacatcagtggggttctgctttctgtagt
cgaaaggtttttggggatagctatgaatcctccagcaggaggaggacacgatctaatact
ctctattcaaggcagtctgctagtccagaatacaggatacggtcgtttattgaaaggaca
gacctgcatagccagaggggactccatgagagacactattactgttatgaaagatgcagg
tcgaggagtcggtcaagcaacaggtcaaggactccttctggaggaactgacaggatgaaa
agcgaaaagcctggtggaaaaaggaagtacaaaactcgccacctagaaagtgcattcatg
gagagcacaagtttggaaagagaaaatgaccccaagaaaacttcctcaaaattcagtgac
tgctgcaaaaatgaagatagcctgtcggacaatcgagcaagtaccgagacaaagcgtaaa
aaaaggaagaagaagatgaggagtccaagtgtggagatagtctatgagggaaaagcagtg
gacacaacaagacatcttaaaaagaaaaagaaaaagcataagaagaaacaccggaaacat
cacacgagtaactcagcacattcttctccagtggtgatcacaattgatagtgatagtagc
aaggagccagaaagtactgaatgggacagtggtgttacttggacaggcacaactcagaga
aatgagagggaaaatgagtctccatcttcttttttaaggacagggtgtgaggaaactgga
ggagcagacaaaaagtacaatatctctaccacaagggaagactcagatggtgacattaca
aatcctgatgtcaaacttcaaggaacagcagctgatcagagtgttaccacagcagatacc
cacagtaacacctctcacacagaaactgtaaccagctacgttcaggaagcaccagcagca
ccttccagtcaactgtcttcccccaggatttccttcctagagtgtccagagagacaacca
ttgatactgagactgccaaagagacttgtcagcagatcctcttggtttgatttcccagaa
gaaaaaatgtag
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