Empidonax traillii (willow flycatcher): 114073235
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Entry
114073235 CDS
T05887
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03082
ATP-dependent chromatin remodeling
etl03083
Polycomb repressive complex
etl04110
Cell cycle
etl04330
Notch signaling pathway
etl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114073235
03083 Polycomb repressive complex
114073235
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114073235
04350 TGF-beta signaling pathway
114073235
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114073235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114073235
Enzymes [BR:
etl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114073235
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114073235
HDAC complexes
Sin3A-HDAC complex
114073235
BRAF-HDAC complex
114073235
REST complex
114073235
SHIP complex
114073235
MiDAC complex
114073235
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114073235
Heterochromatin formation proteins
Other heterochromatin formation proteins
114073235
Chromatin remodeling factors
NuRD complex
114073235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114073235
NCBI-ProteinID:
XP_027766827
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MSITVLVDSPLDLGINVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGL
HHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFH
KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVL
QCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG
NT seq
661 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcacggtgttggtggactctcccctggatctcggcattaacgttggggaggac
tgccctgtgtttgatgggctgtttgagttctgtcagctctctgctggaggctctgttgcc
agtgcagtgaagctgaacaagcagcagacagacattgcagtgaactgggcaggaggcctc
caccacgccaagaagtcggaggcctctggcttctgctacgtcaacgacatcgtcctggcc
atcctggagctcctgaagtatcaccagagggtgctgtacatcgacatcgacattcaccac
ggggatggtgtggaggaggccttttacaccacggaccgtgtcatgaccgtgtccttccac
aagtacggggaatacttcccaggaacgggggacctgcgggacattggtgcaggcaaaggc
aagtactacgctgtgaactaccccctccgggacggcatcgacgacgagtcctacgaagcc
atcttcaagcccgtgatctctaaagtcatggagacgttccagccgagcgctgttgtcctg
cagtgcgggtcggattccctgtccggggacaggctgggctgcttcaacctcaccatcaaa
ggtcatgccaagtgtgtggagtttgtgaaaagctttaacctgcccatgctgatgctggga
g
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integrated database retrieval system