KEGG   Empidonax traillii (willow flycatcher): 114073235
Entry
114073235         CDS       T05887                                 
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03082  ATP-dependent chromatin remodeling
etl03083  Polycomb repressive complex
etl04110  Cell cycle
etl04330  Notch signaling pathway
etl04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114073235
   03083 Polycomb repressive complex
    114073235
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    114073235
   04350 TGF-beta signaling pathway
    114073235
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    114073235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114073235
Enzymes [BR:etl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114073235
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114073235
   HDAC complexes
    Sin3A-HDAC complex
     114073235
    BRAF-HDAC complex
     114073235
    REST complex
     114073235
    SHIP complex
     114073235
    MiDAC complex
     114073235
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114073235
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114073235
  Chromatin remodeling factors
   NuRD complex
    114073235
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114073235
NCBI-ProteinID: XP_027766827
LinkDB
Position
Unknown
AA seq 220 aa
MSITVLVDSPLDLGINVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGL
HHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFH
KYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVL
QCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLG
NT seq 661 nt   +upstreamnt  +downstreamnt
atgagcatcacggtgttggtggactctcccctggatctcggcattaacgttggggaggac
tgccctgtgtttgatgggctgtttgagttctgtcagctctctgctggaggctctgttgcc
agtgcagtgaagctgaacaagcagcagacagacattgcagtgaactgggcaggaggcctc
caccacgccaagaagtcggaggcctctggcttctgctacgtcaacgacatcgtcctggcc
atcctggagctcctgaagtatcaccagagggtgctgtacatcgacatcgacattcaccac
ggggatggtgtggaggaggccttttacaccacggaccgtgtcatgaccgtgtccttccac
aagtacggggaatacttcccaggaacgggggacctgcgggacattggtgcaggcaaaggc
aagtactacgctgtgaactaccccctccgggacggcatcgacgacgagtcctacgaagcc
atcttcaagcccgtgatctctaaagtcatggagacgttccagccgagcgctgttgtcctg
cagtgcgggtcggattccctgtccggggacaggctgggctgcttcaacctcaccatcaaa
ggtcatgccaagtgtgtggagtttgtgaaaagctttaacctgcccatgctgatgctggga
g

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