Empidonax traillii (willow flycatcher): 114073726
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Entry
114073726 CDS
T05887
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114073726 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114073726 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114073726 (PCDH11X)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114073726 (PCDH11X)
Cell adhesion molecules [BR:
etl04515
]
Cadherins
Protocadherins
114073726 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
VirB8
DUF6249
Motif
Other DBs
NCBI-GeneID:
114073726
NCBI-ProteinID:
XP_027767272
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTASNRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISTLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVACFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADAGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNESVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtattccaa
tctggcgcacaggagaagaattacaccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctaacactggacccagacgtgcccctttcctcacca
ctgcagttcaagctcgtgtacaagactggggatgtgccactggtcagggtagaggagaac
actggggagattttcacagcttcaaaccgcatcgaccgggagaagctctgtgccggcatc
ttcagtgagaaccgctgcttctatgaggtggaggtggctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaacgccccccttttcccc
tcgacggtgattaacatctctatccctgaaaacacagcaattaattctcgctattctgtc
ccgtctgccatcgatccagacatcggtgtcaacgggattcagcattatgagctgctcaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgatcagggtcaaaatgta
tttggtcttgatataactgagacacccgagggagataagtggcctcaactgattgtccag
cagatcctggatagggagcagaaggatacctatgtgatgaaaataaaagtggaagatggt
ggaagccctccaaggtccagcactgccatcctgcaggtcacagtgaccgatgtgaacgac
aaccgcccggtgttcaaagagaacgacgtcgaagtcagtgttcccgaaaatgctccagtg
ggcacctctgtttctcagctccacgccactgatgcagacctgggctcaaatgcacaaatc
cacttctatttcagcaatcagatctccactttggccaaaaggctgtttgccatcgataac
accactggcctcatcactataagggaaccactggacagggaggaatctcctgtacacaaa
ttaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgttaat
gtcacagatattaatgacaatgtcccatcgatagacacgagatacatcatcaatccagtg
aatgggacagtacttttgtctgagaaggctccccttaacacaaaaatagcattgataaca
gtaatggacaaggacgctgatcagaatggaaaagttgcctgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataatcagtttctcctggagacagccacatttctg
gactatgaagcaacacgggaatatgccattaaaatagtggcttcagattcagggaaacct
cccttaaaccagtctgcaatgcttctgatcaaaattaaagatgagaatgacaatgcccca
gtttttacgcagcctatcattggcctttccatccctgagaacaatgctcctggtactcag
ctgaccaagattagtgctacagatgctgacagtgggcggaatgctgagatcagctacatc
ctgggttcagatgcaccccctattttcaaccttgaccgccgaacaggaattctgacagca
gtgagaaagctggacagagaaaagcaagacaggtactctttcactgtgctggctaaggat
aatgggatgccacctttgcagaccaatgctaccgtgacagtgtcagtcctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaacctgccc
atgtatggcacagtggggcttatcacagttacagatgctgatgcgggagaaaatgctgca
gtcactctctctatcttaaatggtagagataatttcattatagatccacttactggtgta
ataagacctaatattacctttgatagggaacagcaggggtcatatactttccaggtgaaa
gctgtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgataacaggcctgtttttgttattccttcatccaattattcctatgagttg
gttccaacatcagccagcccggggtctgtagttactaaagtctttgcagttgataatgac
acgggaatgaacgcggagctccgctatagcatcataggtgggaactccaggggcttgttt
acaattgaccaattaacaggcaatattactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctgggacagccagagtctctttacaca
atagctcttgtgcatctgtttgtgaacgagtcggtcaccaacagctcctacgtgcaagag
ttagtgcgcaggaacatggaaactcccgtgggccagaacattggggatggtgagataacc
ccccagaccaacgattatgtcaagatcatcattgccattattgcaggcactatgacagtt
attctggtaatttttgttactgctttagtccgctgccgccagacgcccaggcacaaggtt
gtccagaaaaacaagcagagtggtgaatgggtttccccaaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccaaagagtcttctcctcaactttgtgact
attgaagaatccaagcctgatgatcctggacacgagcacataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataattgggccaccacaccaaccaca
tttaagcctgatagcccagatttagcaaagcactacaagtctgcttctccacagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaattg
cctctagataacacctttgtggtgggctgtgactcgctttccaagtgctcatcaagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagctctga
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