Emergencia timonensis: CE91St48_03230
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Entry
CE91St48_03230 CDS
T08071
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
etm
Emergencia timonensis
Pathway
etm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St48_03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etm03021
]
CE91St48_03230
03019 Messenger RNA biogenesis [BR:
etm03019
]
CE91St48_03230
Transcription machinery [BR:
etm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CE91St48_03230
Messenger RNA biogenesis [BR:
etm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CE91St48_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
S1CSD-TOTE-2
NACHT
AAA_22
OB_RNB
AAA
ATPase_2
AAA_25
Mor
Motif
Other DBs
NCBI-ProteinID:
BDF06882
LinkDB
All DBs
Position
345102..346391
Genome browser
AA seq
429 aa
AA seq
DB search
MVPAMKMPRKKKEELLEEEKECMIEEPDAPEEKKEIICCEEEAEKRERPVREEKKEQPRP
EVEGILEIAEGGFGFLRFNNFLTSDKDVYVSPTQIRRFNLKTGDQIKGISRLPNEGERFG
ALLYVLTVNGDEPGVAIRRPDFEDLTPIFPRERLTLEDGSRDLSMRLIDLIAPIGKGQRG
VIVAPPKAGKTTLLKRVANSIEKRHPEAEMIVLLIDERPEEVTDMKRSLNGGEVIYSTFD
ELPQHHVKVAEMVLARAQRLVEHGKDVVILLDSITRLARAYNLVVPSSGRTLSGGLDPGA
LHKPKKFFGAARNIEEGGSITILATALVETGSRMDDVIFEEFKGTGNMELHLDRKLSEKR
IFPAIDLNKSGTRKEDLLMTQDELEAIWAMRRQMANSPTQDVTETIIDNLAHTKNNSDFV
QIIKKIFLQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
ttggtgcctgcaatgaagatgccaagaaagaaaaaagaagaactattagaagaagaaaaa
gaatgtatgatagaagagcctgacgctcctgaggagaagaaagagattatctgctgtgaa
gaggaggctgagaagcgggaaagacctgtgcgagaagaaaagaaggagcagcctcgtcca
gaagtcgagggtattttggaaatcgctgaaggcggtttcggctttctcagatttaataac
ttcttgaccagcgataaggatgtgtacgtatcgccgacacagatcagacgttttaatctg
aagacgggggaccagatcaaggggatttccaggctgcccaacgagggcgaacgatttggt
gcgctgctgtatgttttgaccgtcaacggagacgagccgggagtggcgatcagaagaccc
gattttgaggatttgacgccgatttttccaagagagagactgacattagaggatggttcc
agagatctgtccatgagactgattgatttgattgcgccgatcggaaaaggtcaaaggggc
gttattgtagcgccgcctaaggcgggaaagacgactttgctcaagcgagtcgccaacagt
attgagaaacgacatccggaagcagagatgattgtgcttttgatcgacgaaagaccagaa
gaagtgaccgacatgaagcggtctctcaacggaggtgaggtcatctattccacctttgac
gaactgccgcagcaccacgtcaaggttgcagagatggtactggctagagcgcagagattg
gtggagcacggcaaagatgtggtcattctgctggacagcatcacaagactcgccagagcc
tacaatcttgtcgtaccgtcatctggcagaaccctgtcgggcggactcgatccaggcgcc
cttcacaaaccgaagaaattctttggcgctgctcgaaatattgaagaaggcggcagcatc
accattttggcgacagccttggtagaaacaggaagccgtatggacgatgttatatttgag
gaatttaagggtacaggtaatatggagcttcatttagaccgcaagctgtctgaaaagaga
atcttcccggctatcgatctgaacaaatcaggtaccaggaaagaagacctcttgatgacg
caggatgaattagaagcgatttgggcaatgaggcgccaaatggccaatagtccgacccag
gatgtcacagagactatcatcgacaacctggcgcacacgaaaaacaatagtgattttgtt
cagatcataaagaagatatttttgcaatag
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