Emergencia timonensis: CE91St48_08660
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Entry
CE91St48_08660 CDS
T08071
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
etm
Emergencia timonensis
Brite
KEGG Orthology (KO) [BR:
etm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etm03400
]
CE91St48_08660 (sbcC)
DNA repair and recombination proteins [BR:
etm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CE91St48_08660 (sbcC)
Archaeal homologous recombinant proteins
CE91St48_08660 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
ABC_tran
AAA_21
SMC_N
ABC_tran_CTD
HrpB7
nSTAND3
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDF07425
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All DBs
Position
944769..947531
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AA seq
920 aa
AA seq
DB search
MRPTKLTISAFGPYAGRQVLDLDKLGTKGIYLVTGDTGAGKTTIFDAITFALYGETSGDI
RRSDMLRSKYAADDVPTEVELIFAYGGKEYTVRRNPEYQRPSKRGGGIVTQKADAQLTYP
DGNIVTKTKDVTAAVESILGVNRNQFTQIAMIAQGEFLKLLLAPTEDRKKIFRKIFKTEL
FQELQDRLKSESGKLSQRLEEIKNSIGQYIDGLEIEENEELLKNAKDSDILLADLIGKVD
DVIASDQAEQDKIEGDIAKIEKRLTQVNVDLGKAEEVERTEVALQEVSSALGEKKERLQL
LLAEYEAEQKREPEQSALRQQIALAENELPRYDELDQVRKELDARRDALKAALDQREEQK
NLQDKCALLLNDAKEKLEAVKDAGREEAVLEGRLQQAESRLNAVEALGGALKEWESLSKR
LEEEQQKYLAAAAKAEKLQQKYQQMNRAFLDEQAGILALALDAGMPCPVCGATEHPSPAA
KTADAPSESDLEKAKKKSETAQADAASCSAEASTLGGKVTAKEEELKKKGAELFDEVVFA
ELSMKIAGEVKENKSQIGDLKELLRLEQEKLQQKARLEAQIPKLETELQKRQETLASLDQ
QSAALEGVIKESEKTLASVAARLKYESKAQAERQIKKLQSEADAMQKTLEKARDGYTACK
EEVSTLQGRVESLSGQLEAAPEYDVGVMRRRQAELTEEKKALSESFTAISARIGSNSAAL
EKIRSQAENLAEISEKWGWVKVLSNTANGNLGGKEKIMLETYVQMRYFDLVIQRANRRLM
VMSDGQYELKRRNEAENNRSQSGLELDVIDHYNGSQRSVRTLSGGESFKASLCLALGLSD
EIQSSAGGIRLDTMFVDEGFGSLDDESLQQAIKVLSGLSEGNKLVGIISHVGELKERIEK
QIVVTKDRAGGSRAEMNCDI
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgacaaaactgacgatttcggccttcgggccttatgccggacggcaggtcctg
gacttggacaagctggggacaaaggggatctacctggtgaccggggataccggagcggga
aagaccacgatttttgatgccatcacctttgccctctatggggaaaccagcggagacatc
cgcaggagtgacatgctgaggtcgaaatacgcggcagacgacgtgccgacggaggtggaa
ttgatctttgcctatggcggcaaggaatatacggtacgcagaaatccggaataccagcga
ccgtcaaagcggggaggcggtatagtcacccagaaggcagatgctcagttaacatatccg
gacggcaatattgtgaccaaaaccaaggatgtgacggcagcagtggagtcgatactgggt
gtaaatcgaaatcaatttacccagatcgccatgatcgcccagggggaatttttgaaactg
cttttggcgcccacagaagatcggaagaagatttttcgcaagattttcaagacggagttg
ttccaggaactgcaggatcgcctcaaatcggaatcaggaaagctgtcacagcggcttgag
gagataaaaaacagcatcggtcagtacatcgacggactggagattgaagaaaacgaagaa
ttgctgaaaaatgcaaaagattccgatatattgttagctgatttgattggaaaagttgac
gatgtaattgccagtgaccaggcagagcaagataaaatcgagggcgatatcgccaaaatt
gaaaagcggctcacccaggtcaatgtggatctgggaaaggcagaagaagtggaacggacc
gaggtcgccctgcaagaggtgagttccgctttgggggaaaagaaggagagactgcagctt
cttttggcagagtatgaagcagagcagaagcgggagccagagcagtccgctctgcgccag
cagatcgctttggcggagaatgaattgccccgatacgatgagcttgaccaggtgcgaaaa
gaactggatgccaggcgagatgcgcttaaggcggcattggaccagagagaggagcagaag
aatctgcaggataaatgtgcattgttgttaaacgatgcaaaggaaaaactggaagcagtc
aaggatgcgggcagagaagaagcggttttggaaggcaggctgcagcaggcagaaagccgg
ctgaacgccgtagaagccttgggcggcgcattgaaagagtgggaaagcctttcgaagcga
ttggaagaggagcagcagaagtatctggccgctgcagcaaaggcggagaaactgcagcag
aagtatcagcagatgaacagggcattcctcgatgaacaagccgggattttggcgctggct
ctggatgcaggcatgccgtgcccggtatgcggtgcgacggaacacccgtcacctgcggcc
aagacggctgatgcaccttctgaatccgatttggaaaaggcaaagaagaagagtgaaacg
gcacaggctgatgccgcttcttgtagtgcagaggccagtacccttgggggcaaggtcact
gcgaaagaagaggaactcaagaagaaaggcgcggagctctttgacgaggtggtctttgca
gaactcagtatgaaaatcgcaggtgaagtgaaggaaaataaatcgcagattggcgatttg
aaagagcttttgcgactggaacaggaaaaattacagcaaaaagcacggctggaagcgcag
attccaaaactggagacagagcttcaaaaacggcaggagacactggcgagcctggatcaa
cagtcggcggctttagaaggtgtaatcaaggagagcgagaagactttggcctctgtggcg
gccagactgaaatatgagagcaaggctcaggcagagaggcagatcaagaaactgcagtca
gaggcggatgcgatgcagaaaaccttggagaaggcaagggatggttacaccgcctgcaaa
gaggaagtaagcactctgcagggacgggtggaaagtctttctgggcagctagaagcggcg
ccggagtacgacgttggcgtcatgcgccgcaggcaggctgaactgacagaagagaaaaaa
gccttgagcgagtcttttacggcaatctcggcgcgaattgggtctaacagcgcagccctt
gagaaaatccgcagtcaggcagagaacttggcagaaatctcggaaaaatggggctgggtc
aaggttctttccaatactgcaaacggcaatctcggcggcaaagagaaaattatgctggaa
acctatgtgcagatgcggtacttcgatttggttattcagcgcgctaacaggcggctgatg
gtcatgagcgatgggcagtacgagctgaaacgacgcaatgaggcagagaacaaccgcagc
cagagcggtctggaactggatgtcatcgaccactataacgggtcacagcgcagcgtgcgc
accctgtccggaggtgaatccttcaaagcctccctctgcctagctctgggcctttctgac
gaaatccagtcctcggcaggggggatccgcctggataccatgttcgtggacgagggtttc
ggttccctggacgatgaatctctgcagcaggccatcaaggtgctttccggcctgtccgaa
gggaacaagctggtgggcatcatttcccatgtgggtgaactgaaagagagaatcgaaaag
cagatcgtggtgacgaaggacagagcaggaggcagccgggcggagatgaattgtgatatc
tga
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