Emergencia timonensis: CE91St48_10190
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Entry
CE91St48_10190 CDS
T08071
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
etm
Emergencia timonensis
Pathway
etm03030
DNA replication
etm03430
Mismatch repair
etm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE91St48_10190 (dnaE)
03430 Mismatch repair
CE91St48_10190 (dnaE)
03440 Homologous recombination
CE91St48_10190 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etm03032
]
CE91St48_10190 (dnaE)
03400 DNA repair and recombination proteins [BR:
etm03400
]
CE91St48_10190 (dnaE)
Enzymes [BR:
etm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CE91St48_10190 (dnaE)
DNA replication proteins [BR:
etm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CE91St48_10190 (dnaE)
DNA repair and recombination proteins [BR:
etm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CE91St48_10190 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
BDF07578
LinkDB
All DBs
Position
1125550..1129077
Genome browser
AA seq
1175 aa
AA seq
DB search
MAFTHLHVHTEFSLLDGAARITDVVTRAKELGMDSLAITDHGVMFGVIDFYKECKKQGIK
PIIGCEVYTAARTMLDKDADKDKYQGHLVLLAKDNEGYRNLIKIVSKGFTEGYYYKPRID
KNVLREHNEGIIALSACLAGKVQNCLLNRDYDGARTEAMAMDEIFGHGNFYLELQDQGLE
EEAMINPSLVKLSKELDIPLVATNDVHYVRQEDAEAHDVLLAIQTATTIDDEKRMRFPND
QFYLKTEDEMKKIFAYAPEAIENTQRIAERCNVEFTFGEYHLPEFVPPEGKTNQQYLREL
CQKGLHERYDHVTEELQERLSYEMGVIESMGYVEYFLIVWDFINFAKVNNIMVGPGRGSA
AGSLVAYSLKITDIDPIRYNLIFERFLNPERVSMPDVDIDFCIERRGEVIDYVIKKYGKE
NVSQIITFGTMKAKAAVRDVGRALNLSYAEADKVAKAIPFELKMTIDKAMDMNPELREMY
QSDDRIAKVIDMSRAIEGMPRHASTHAAGVVISKLPLDEYVPLYMSDKGVATQFNMTTIE
ELGLLKMDFLGLRNLTVIRDALELIEKNYGVTIDFARMGYDESSVYEMIASGNTDGVFQL
ESGGMTQFMKNLKPTCFEDVVAGISLYRPGPMDSIPKYIEYKKNPHKIKYVTPELAPILD
VTYGCLVYQEQVMQIVRDLAGYSFGRSDIVRRAMSKKKKDVMLQEKEYFINGKTDEEGNI
EIMGCVRNGISAQAAEAIFADMETFAQYAFNKSHAAAYAVVAYETGYLKKFYPVEFMAAL
MTSVMGDAKYISRYIRNCQDMGIEVLPPCINESQKKFSVVDGKIRFGLLGVKNVGEGAID
AIIKAREEKGYPSDIFQFINNVEISEVNKKAVESLIKAGALDCLNTNRAAHLAVYEGLVE
SAQNNAKKNIAGQMSLFQISSEEMSSGDTSGTLPQVNNFSKDVLLAMEKEMVGVYITDHP
LNEYTDRIKKLATTTSEELASAAESETPDTRIKDGMTVTMAGMIAGKKNLVTKNNKMMAF
VDLEDLYGEVEVVVFPNVYERCREAIEEDNVVVVKGKLNFKEEEMPKLLADSVVDIDGVE
EKLSQSSERPSRPSRGTEPDSVKVRIPAEADEEETLAALREIFHQHRGNAPVLIYLQNGK
IVKTGQGAGVYPTIDFFDTVAEVVGRPNVKGRPSF
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacacatttacatgttcatacagagttcagcctgctggacggcgccgctcgc
attaccgacgtggtaacgagggccaaagaactgggcatggactctttagcaattacagac
cacggcgtcatgttcggcgtcattgatttttacaaagagtgtaagaagcagggaatcaag
ccgattataggctgtgaagtctatacggcggccaggaccatgctggacaaagacgcggac
aaggacaaatatcagggacaccttgtcttgctggcgaaagacaacgaaggttatagaaat
ttaattaaaatcgtatccaagggttttacggaaggatactattataaaccccgcatagat
aaaaacgttttgcgggaacataacgagggaattatcgcgctttctgcctgcctggcagga
aaagtgcagaactgtctcctcaacagggattatgatggtgccaggacagaagcgatggct
atggacgaaatcttcggtcacggtaatttttacttggaactgcaagaccaggggctggaa
gaagaagcgatgattaaccccagcttggtaaagctgtcaaaggagcttgatattccgctg
gtggctaccaacgacgtgcattatgtcaggcaagaggacgccgaggcacacgatgtgctg
ctggcgattcagacagccaccacgatcgacgatgaaaagagaatgcgctttcctaacgat
cagttttatttaaagaccgaggatgagatgaagaagatcttcgcctatgcgccggaggcc
atcgaaaatacccaaagaatcgcagagcgctgtaatgtggagtttacctttggcgaatac
cacttgccagagttcgtaccgccagaaggtaaaacgaaccagcaatatctgcgagaatta
tgccagaaaggactgcacgagagatatgaccatgtgaccgaagagctgcaggaacgactg
tcatacgagatgggtgtcatcgagtccatgggttatgtagagtacttcctcatcgtatgg
gattttattaactttgctaaggtaaataacatcatggtagggccgggacgaggctccgcc
gccggcagtctggtagcctacagcctgaagattaccgacatcgatccgattagatataac
ttgatttttgagcgattcttaaaccctgagagagtcagcatgcccgatgtggatatcgac
ttctgcattgaacgccggggtgaggtgatcgactatgtcattaaaaaatacggcaaggag
aacgtttcgcagatcatcacctttggaaccatgaaagcgaaggcggctgtacgtgacgtg
ggccgcgcgctgaatctcagctatgccgaagcggacaaagttgccaaggccatacccttt
gaactgaagatgaccatcgacaaagccatggacatgaatccggagctgagagagatgtac
cagtccgatgatcgaatcgccaaggtcatcgacatgtcgagagccattgaaggcatgccg
cgccacgcatcgacccatgcggcaggcgttgtaatatcaaagcttcctctggacgagtac
gtaccgctgtatatgtctgacaaaggggtcgctacccagttcaatatgaccaccatcgaa
gagttgggtttgttgaagatggacttcctcggtctgcgaaatctgacggtaatcagagac
gccctggagttaatcgaaaaaaattacggcgttaccatcgactttgccagaatgggttat
gatgagtcttcggtctacgaaatgattgccagcggaaataccgacggcgtgtttcagctg
gagagcggcggcatgacccagttcatgaaaaacctgaagccgacctgctttgaggatgtc
gtagcgggcatctctctttacagaccgggaccgatggactccattcccaaatatatagaa
tacaagaaaaaccctcataaaattaagtacgtgacgccggagctggcgccgattttggac
gtcacttacggctgccttgtttatcaggaacaggttatgcagattgtccgggatttagct
ggctacagctttggccgttcagacatcgtgcgtcgtgccatgagtaaaaagaagaaagac
gtcatgctgcaggagaaagagtatttcatcaacggcaagacggatgaagagggcaacatc
gaaatcatgggctgcgtacgcaacggtatttcggcccaggcggcagaggctatctttgcc
gatatggagacctttgcccagtacgctttcaacaaatctcacgcggcggcttatgcggtg
gtcgcttacgaaacgggctatttgaaaaaattctatcctgtagagtttatggcggcgctg
atgaccagcgttatgggtgacgccaagtatatatcgagatatattagaaattgccaggac
atgggcatcgaagttctgccgccatgtatcaacgagagtcagaaaaagttttctgtagtc
gatggaaaaatcagatttggacttctcggtgtaaagaacgtgggggaaggcgcgattgac
gcgattatcaaagcgagagaagagaaggggtaccctagcgatatcttccagtttatcaac
aacgtggaaatcagcgaggttaacaagaaagcggtggagagtctgattaaagccggcgct
ctcgactgtctgaataccaatagggcggcgcacctggctgtttacgaaggtctggtagag
tcggcacagaataacgccaagaaaaacatcgccggccagatgtctctcttccagatcagc
agcgaagagatgagcagcggcgatacgtcgggaaccctgccgcaggtgaacaactttagc
aaggatgttctgctggctatggagaaagagatggtgggcgtgtacatcacggatcatcct
ctcaacgaatataccgatcgcattaagaaattggcgacgaccaccagtgaggaattggcc
agcgctgccgaatcggagacgccggacacccgcatcaaagacgggatgacagtgactatg
gcgggcatgattgcaggaaagaaaaacctggtgacaaaaaacaacaagatgatggccttt
gtagacttagaagacttgtacggcgaagtggaagtcgtggttttccccaacgtctacgag
cgctgccgtgaagcgatcgaagaggacaacgtcgtcgtcgtcaaaggaaagcttaatttt
aaggaagaagagatgccgaagctgcttgctgattccgttgtggatatcgacggggtagaa
gagaagctgtctcagtcgtctgagcggccatcccggccgtccagaggaacagagccagac
tcagtcaaggtgagaattccggcggaggcagatgaagaggaaacccttgccgctttgcga
gagattttccatcagcacagaggaaatgcgccagttctgatttatttgcaaaatggcaaa
attgtcaagactggtcaaggcgcaggtgtttatccgaccattgacttttttgatacagtg
gctgaagtagtaggacgacctaacgttaaagggagacctagcttttaa
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