Emergencia timonensis: CE91St48_33380
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Entry
CE91St48_33380 CDS
T08071
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
etm
Emergencia timonensis
Pathway
etm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St48_33380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etm03019
]
CE91St48_33380
03009 Ribosome biogenesis [BR:
etm03009
]
CE91St48_33380
Enzymes [BR:
etm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CE91St48_33380
Messenger RNA biogenesis [BR:
etm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CE91St48_33380
Ribosome biogenesis [BR:
etm03009
]
Prokaryotic type
rRNA helicases
CE91St48_33380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BDF09897
LinkDB
All DBs
Position
complement(3524051..3525562)
Genome browser
AA seq
503 aa
AA seq
DB search
MNYNESKISKMILNGLEEMGFVKMTPIQEMAIPELMEGRDIIGQAQTGTGKTAAFGIPMI
EGIDPKDNGVQGLILCPTRELAIQASEELKKMAKHVAGVKVVAIYGGQDIERQFKALKGR
VSIVVGTPGRVMDHMRRKTLNFDNLKMLVLDEADEMLNMGFREDIETICRAMPEERQTAL
FSATMPKEILEITEQYQKNAKLVKVKQEELTIPLVKQVHYVVKGREKDTSLCRLLDYMSP
QRALIFCNTKRKVDQLTLLLKSKGYAAEALHGDLSQHQRDRVMNLFRNGSLELLLATDVA
ARGIDVDDVDMVFNYDMPQDMEYYVHRIGRTGRAGKNGKAVSLITSREKYKIDSLENYCN
TEIKRKDMPTATSAMTVKAYKNVKDAMDYCQDKDLVPYMKIVYKQCVEEEMEPLMVAAAF
LRQSLGEIEAEPKQENRASRGDRSGKGGRSGKSGKDGRHGKKPEVPGGRAGRDKKKGNKD
GKRTKSSSKDRGYDRSRPGRRKK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaattataacgaatcaaaaattagtaagatgatacttaacggccttgaggagatgggt
tttgtaaagatgacgccgatccaggagatggcaattccagaactcatggagggcagagat
atcataggtcaggcccagaccggtaccggtaagactgcagcttttggcatacctatgatt
gaaggcattgatcctaaggacaacggcgtgcaggggctgattctatgtcctaccagagaa
cttgccattcaggcgtcagaagaactgaagaagatggcaaagcatgtagctggggtcaaa
gtcgtagctatctatggaggccaggatatagagagacaatttaaagcgctgaagggcagg
gtatctatcgtcgtcggaacacctggcagagtgatggaccacatgagacgcaaaacgtta
aactttgataatttaaagatgctggttttggatgaggcagacgagatgctcaatatgggt
ttccgtgaagatatcgaaactatctgccgtgcaatgccagaggaacgtcagaccgctctt
ttctctgccaccatgccaaaggaaattttagagattacggagcaatatcaaaaaaatgct
aagctggtcaaggtgaagcaggaagaactgaccataccgctagtaaaacaggttcattat
gttgtaaagggcagagaaaaggatacctccctctgcaggcttctcgattacatgtccccc
cagcgggctttgatcttctgcaacacaaagagaaaagtagatcagctgactttgctgctg
aaatcaaagggttatgcggctgaggcgctgcacggcgacctgtcccagcaccagagagac
agagtgatgaatttgttcagaaacggcagcctggagcttttgctggccactgacgttgcg
gctcgcggaattgacgtagatgatgtagatatggtgttcaactacgatatgccgcaggat
atggaatattatgtccatcgaatcggacgtacgggaagagccggcaaaaacggcaaagcg
gtgtctttgatcaccagccgcgagaaatacaagattgactctctggagaactattgcaac
acggagatcaaacgaaaagatatgccgacggcgaccagcgctatgacggtaaaggcctat
aaaaatgtaaaggatgccatggactattgtcaggataaggacctggtgccgtacatgaag
atcgtatataagcaatgcgtggaggaagagatggaaccgctgatggtggcggcagctttc
ctcagacagagtttgggcgaaatcgaggcggagccgaagcaggaaaacagggccagcaga
ggcgatagatctggcaaaggcggacgctcgggcaaatccggcaaggacggccgtcacgga
aagaagccggaagtgccgggcggacgtgcaggccgagacaagaagaaaggtaacaaggat
ggaaagaggacaaagagttcaagtaaagatagaggatatgacagaagccggccagggcgt
aggaagaagtaa
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