Winslowiella toletana: RIN69_02640
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Entry
RIN69_02640 CDS
T09410
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eto
Winslowiella toletana
Pathway
eto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RIN69_02640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eto03019
]
RIN69_02640
03009 Ribosome biogenesis [BR:
eto03009
]
RIN69_02640
Enzymes [BR:
eto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RIN69_02640
Messenger RNA biogenesis [BR:
eto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RIN69_02640
Ribosome biogenesis [BR:
eto03009
]
Prokaryotic type
rRNA helicases
RIN69_02640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNN44831
LinkDB
All DBs
Position
564665..566608
Genome browser
AA seq
647 aa
AA seq
DB search
MTTIETTTEIETTFADLGLNAALLESLNGMGYVKPSPIQLECIPHLLAGRDVLGMAQTGS
GKTAAFSLPLLNNVDSNLKAPQILVLAPTRELAVQVAEAMTEFSKKMNGVNVVALYGGQR
YDVQLRALRAGPQIVVGTPGRLLDHLKRGTLNLSSLRGLVLDEADEMLRMGFIEDVETIM
AQIPDGHQTALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWTAYGRKTDA
LVRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGR
LDILIATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERR
LLRNIERTMKLTIPEVDLPNAELLSERRLAKFAAKVQLQLESSDLDQYRALLAKMQPEEE
LDMETLAAALLKMAQGERPLILPPDAPQRPRREFRDRDDRRDDRRGERGDRAPREARDGD
RPRRERREVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELP
KGMPGDVLSHFTRTRILNKPMNMQLLGDAQPRSNDRGAERGGERRPGGRGGFGGGAGREG
GRDGGAPRRFSERREGGNGGRGGFSRDGGNRGPRQDGGSAPTRRRDA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgactacgatcgaaaccacgactgaaatcgaaactacttttgctgacctgggcctgaat
gctgcccttctcgaatccctgaacggtatgggctacgtaaaaccatcacctatccagtta
gagtgtatcccacacctgctggctggtcgtgacgtgctgggcatggcccagactggtagt
ggcaaaacagctgcattctctctgcccctgctgaacaatgttgatagtaatctgaaagca
ccacagattctggtgctggcaccaactcgcgagttggcggttcaggttgctgaagctatg
actgaattctctaagaaaatgaacggcgtaaacgttgtggccctgtatggcggccagcgt
tatgacgttcagctgcgtgctctgcgtgccggtccacagatcgttgtgggtactccgggc
cgtctgcttgaccacctgaaacgcggtacgctgaacctgtccagcctgcgtggtctggta
ctggacgaagcagatgaaatgctgcgtatgggcttcatcgaagacgttgaaaccatcatg
gcgcagatcccagacggtcatcagaccgcgctgttctctgcaactatgccggaagctatt
cgtcgtattactaaacgctttatgaaagatccgcaggaagtgcgtatccagtccagcgtt
actactcgcccggatatcagccagagctactggactgcttacggtcgtaagactgacgcg
ctggttcgcttcctggaagcggaagattttgatgcggcgattatcttcgtgcgtaccaaa
aacgcgacgctggaagtggctgaagcgctggagcgtagtggctacaacagtgctgcactg
aacggtgatatgaaccaggcactgcgtgagcagacgctggagcgcctgaaagatggtcgt
ctggacatcctgattgccaccgacgttgcggcacgtggtctggacgttgagcgtatcagc
ctggttgttaactacgacatccctatggatgctgagtcttacgttcaccgtatcggccgt
accggtcgtgcgggtcgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgt
ctgctgcgcaacatcgaacgcaccatgaagctgaccattcctgaagttgatctgccaaat
gcagaactgctgagcgagcgtcgtctggctaagttcgcggctaaagttcagctgcagctg
gaaagcagcgatctggaccagtaccgtgcactgctggctaaaatgcagccagaagaagaa
ctggatatggaaactctggccgcagctctgctgaaaatggcccagggcgaacgtccactg
attctgccaccagatgcaccacagcgtccacgtcgtgaattccgtgaccgtgacgatcgt
cgtgatgaccgtcgtggcgagcgcggtgaccgtgctccacgtgaagcgcgcgatggcgac
cgtccacgtcgtgaacgtcgtgaagttggcgatatggaactgtaccgcattgaagttggc
cgtgatgatggtgttgaagttcgtcatatcgttggcgcgattgctaacgaaggcgatatc
agcagccgttacattggtaacatcaagctgttcggtactcactcaactatcgagctgccg
aaaggcatgccgggcgatgtgctgtcgcatttcacccgcacgcgtattctgaacaaacca
atgaatatgcagctgctgggcgatgcacaaccgcgtagcaacgaccgtggtgctgagcgt
ggcggcgaacgtcgtccgggtggccgtggtggcttcggcggcggtgcaggccgtgaaggt
ggtcgtgatggcggcgcaccgcgtcgtttcagcgagcgtcgtgaaggcggcaatggcggt
cgtggcggcttcagccgtgacggcggcaaccgtggtccacgtcaggacggcggaagcgca
cccactcgtcgtcgtgatgcataa
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