Winslowiella toletana: RIN69_12480
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Entry
RIN69_12480 CDS
T09410
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
eto
Winslowiella toletana
Brite
KEGG Orthology (KO) [BR:
eto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eto03032
]
RIN69_12480 (topA)
03400 DNA repair and recombination proteins [BR:
eto03400
]
RIN69_12480 (topA)
Enzymes [BR:
eto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RIN69_12480 (topA)
DNA replication proteins [BR:
eto03032
]
Prokaryotic type
DNA Topoisomerases
RIN69_12480 (topA)
DNA repair and recombination proteins [BR:
eto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RIN69_12480 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
WNN42541
LinkDB
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Position
complement(2679713..2682316)
Genome browser
AA seq
867 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTVKKSADSTTSKAAPKKK
VKKDEKAALVSRMGVDPYHGWEANYQILPGKEKVVAELKSLAENADHIYLATDLDREGEA
IAWHLREVIGGDESRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYM
VSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWELAADLTTPKGSDLPMQV
THQGDKPFRPVNGEQTQAAVSLLEKARYVVADREDKPTSSKPGAPYITSTLQQAASTRLG
FGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGFIESSFGAKYLPKDANTYASK
DNSQEAHEAIRPSDVSVQADHLKDMEADAQKLYQLIWRQFVACQMMPAQYDSTTLTVEAA
DFKLKAKGRTLRFDGWTKVMPALRKGDEDRTLPPVNVGDELSLQQLLPSQHFTKPPARFS
EASLVRELEKRGIGRPSTYASIISTIQDRGYVRVESRRFYAEKMGEIVTDRLEANFRELM
NYDFTAHMESSLDEVANNQAQWKGVLDKFFGEFTEQLEQAEKDPEEGGMQPNQMVLTSID
CPTCSRAMGIRTASTGVFLGCSGYALPPKERCKQTINLIPENEVLNVLEGDDAETNALRA
RRRCQKCGTAMDSYLIDPQRKLHVCGNNPGCDGYEIEQGEFRIKGYDGPIVECEKCGSEM
HLKMGRFGKYMACTNDDCKNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAG
VFLAANTFPKSRETRAPLVEELKRFKDRLPEKLSYLADAPVADDDGNKTVVRFSRKTKQQ
YVSSEKEGKATGWSAFFVDGKWQVTKK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtaatagttgagtccccggcaaaggccaaaacaatcaataaatat
ctcggtaatgactacgtggttaagtccagcgtgggtcatatacgcgatttgccgaccagt
ggttcaacagttaaaaagagcgctgactctacaaccagtaaagctgctcccaagaaaaag
gttaaaaaagacgaaaaagcggctctggtgagtcgtatgggcgtcgatccttatcatggt
tgggaagccaattatcagattttgcccggtaaagagaaagtggtcgccgagctgaagtcg
ctcgctgaaaatgctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagcc
attgcctggcacctgcgggaagtgatcggtggcgatgaatcacgctacagccgcgtggta
tttaacgaaattaccaagaatgcgattcgccaggcgtttgagaagccgggtgaactgaat
atcgaccgggttaacgctcagcaggcgcgtcgttttatggaccgcgtggtgggctatatg
gtttctccgctgctgtggaagaaaattgcgcgcggactctctgcgggtcgcgttcagtcg
gttgcggtgcgtctggtggtcgagcgcgaacgcgaaattaaagcgtttgtgccagaagag
tactgggagctggctgccgacctgaccacgccaaaaggcagcgatctgccgatgcaggtc
acgcatcagggcgataagcctttccgtccggtcaacggcgagcagacgcaagcggcggta
agcctgctggagaaagcgcgctatgtggtggccgatcgtgaagataagccaaccagcagc
aaacctggcgctccgtatattacgtcaacgctgcaacaggccgcgagcacccgtctgggc
ttcggcgtgaaaaaaaccatgatgatggcccagcgtctgtatgaagccggtcatatcact
tacatgcgtactgactccaccaacctgagtcaggatgcggtcagcatggtgcgcggtttt
attgaaagcagctttggcgcgaaatatctgccgaaagatgccaatacctacgccagcaaa
gataattcacaggaagcgcacgaagcgattcgtccttcagacgtcagcgtgcaggccgat
catctgaaagatatggaagccgatgcgcagaagctgtatcagctgatctggcgtcagttt
gtcgcctgtcagatgatgccagcgcagtacgactccaccacgctgacggttgaagccgct
gatttcaaactgaaagcgaaaggccgtactctgcgttttgacggctggacaaaagtgatg
ccggcgctgcgtaagggcgatgaagatcgtacgctgccaccggttaatgtcggtgatgaa
ctgagcctgcagcaactgttgccaagccagcactttaccaagccgccagcccgtttcagc
gaagcatcgctggtgcgtgaactggaaaaacgtggcattggccgtccgtctacctatgca
tcgattatttcgaccattcaggatcgtggctatgtgcgggtggaaagccgccgtttctat
gctgaaaaaatgggtgaaatcgtcaccgaccgcttagaagccaacttccgtgagctgatg
aattacgatttcaccgcgcatatggaaagcagcctcgacgaagtggcgaataatcaggcg
cagtggaaaggcgtgctggacaagttctttggtgagtttaccgagcagctggagcaggca
gaaaaagatcctgaagagggcggcatgcagccgaaccagatggtgctgacttccatcgac
tgcccaacctgtagccgtgcaatgggcattcgtaccgccagcaccggcgtgttcctcggt
tgttctggctatgctttaccgccgaaagagcgctgtaagcagaccattaacctgattccg
gaaaatgaagttcttaatgttctggaaggggatgatgcggaaaccaatgcgctgcgtgcc
cgtcgtcgctgccagaaatgtggcaccgccatggacagttatctgatcgatccgcagcgt
aaactgcacgtttgtggtaacaacccaggctgtgatgggtacgagatcgagcagggtgaa
ttccgcattaagggttatgacggcccgattgttgagtgtgagaaatgtggttctgaaatg
cacctgaaaatgggacgtttcggtaaatacatggcctgtactaacgacgactgtaaaaat
acccgcaagattttgcgcaatggcgatgtggcaccaccaaaagaagacccggtaccctta
ccagaactgccttgcgagaagtccgacgcgtattttgtactgcgtgatggtgctgccggg
gtattccttgccgctaacactttccctaaatcgcgggaaacgcgtgcgccgctggttgaa
gagctgaaacgctttaaagaccgtctgccagaaaagttaagttatctggctgatgcgccg
gttgcggacgacgacggtaacaaaaccgtggtgcgttttagccgcaaaaccaagcagcag
tatgtcagctcagaaaaagagggcaaagccaccggttggtccgctttctttgttgacggc
aaatggcaggtcaccaaaaagtaa
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