Winslowiella toletana: RIN69_14670
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Entry
RIN69_14670 CDS
T09410
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
eto
Winslowiella toletana
Pathway
eto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RIN69_14670 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eto03400
]
RIN69_14670 (sbcB)
Enzymes [BR:
eto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
RIN69_14670 (sbcB)
DNA repair and recombination proteins [BR:
eto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RIN69_14670 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RIN69_14670 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RIN69_14670 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WNN42945
LinkDB
All DBs
Position
3098739..3100166
Genome browser
AA seq
475 aa
AA seq
DB search
MKQQASQPTFLFHDYETFGKSPSLDRPAQFAGVRTDLDFNIIGEPEVFYCQPADDYLPQP
EAVMITGITPQQAKARGVSEAEFARRIHALFSEPNTCVVGYNNVRFDDEVTRNIFYRNFY
DPYGWSWQNGNTRWDLLDVMRACYALRPEGINWPENEDGMTSFRLEHLTKANGVEHANAH
DAMSDVYATIAMAKLVKQQQPKLYDYLFSHRSKQKITTLVDIPQMKPLVHISGMFGAFRG
NTSWIAPLAWHPDNRNALITCDLAGDMSPLLELDADALRARLYTPRDQLGDAAAVPIKLV
HINKCPVLAPANTLRPEDAERIGIDRERCLANLTLLRQHPEIREKVVTLFAEAEPFTAAD
DVDARLYDGFFSDADRSAMNIILQTASSNLPALDLTFNDSRIEQLLFRYRARNFPGTLDD
SEQQRWLQHRREALNPERVQSYLLELESLFNLHEGDNDKIAQLKALFDYARELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacagcaagccagtcagccaacattccttttccatgactacgaaaccttcggcaaa
agtccgtcactggaccgcccggcgcagtttgctggcgtacgcaccgatctggatttcaat
attattggtgagccggaagtgttttactgccagcccgctgacgactatctgccgcagccg
gaagcggtgatgattaccggaatcacgccgcagcaggcgaaagcacgcggcgtcagcgag
gccgagtttgcccgccgtatccatgccctgttcagcgaacccaacacctgtgtggttggc
tataacaatgtccgcttcgatgatgaagtgacacgcaatatcttttatcgtaacttctac
gatccctatggctggagctggcaaaacggcaatacccgctgggatctgctggatgtgatg
cgcgcctgctatgcgcttcgtcccgagggtatcaactggccggaaaacgaggatggcatg
acaagttttcgccttgagcatctgacgaaagctaatggcgtcgaacatgccaatgcgcac
gatgcgatgtcagacgtttatgccactatcgccatggcaaagctggtgaaacagcaacag
cctaaattgtacgactacctgttcagccatcgcagcaaacagaaaatcacgacgctggtc
gatattccgcaaatgaaaccgctggtgcatatctccgggatgtttggcgcgtttcgtggc
aataccagctggatagcgccactggcctggcatccggataatcgcaatgcgctgattacc
tgcgatctggccggtgatatgtcgccgctgctggagctggatgccgatgcgctgcgcgca
cgtctgtataccccgcgtgaccagttgggcgacgcggcggcggtacccattaaactggtt
catatcaataaatgtccggtactggcgccagctaacaccctacgcccggaagatgcggaa
cgcattggcatagaccgtgagcgctgtctggctaatctgacgctgctgcgtcagcatccg
gagatccgcgaaaaagtcgtcacgctgtttgccgaggccgaaccctttaccgcagccgac
gatgttgatgcccgcttgtatgatggtttctttagtgatgccgaccgttcggcgatgaac
attattttgcagacggcatcgtcaaatttaccggcgctggatttaacctttaacgactca
cgtattgagcagttgctgttccgctatcgggcacgcaactttcccggcacgctcgacgac
agtgaacagcaacgctggctgcaacatcgccgtgaagccctgaatccggagcgggtgcaa
agctatctgctggagctggagtcactgtttaatctgcatgaaggggataacgacaaaata
gcgcagttgaaggcgctgtttgattacgcccgcgagctggtttcttaa
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integrated database retrieval system
