Winslowiella toletana: RIN69_18020
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Entry
RIN69_18020 CDS
T09410
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
eto
Winslowiella toletana
Pathway
eto03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RIN69_18020 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eto03400
]
RIN69_18020 (recB)
Enzymes [BR:
eto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RIN69_18020 (recB)
DNA repair and recombination proteins [BR:
eto03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RIN69_18020 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WNN43555
LinkDB
All DBs
Position
complement(3896703..3900254)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSDPIPQRLDPLTLPLTGERLIEASAGTGKTFTIGLLYLRLLLGLGQSAAYPRPLSVEEI
LVVTFTEAATAELRGRIRHNIHELRIACVRGVSQNPMLAQLLSQIDDLSQAAAMLLAAER
QMDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLIEDEHALRKQATADFWRRHCYPLPLAI
AQVVAEQWSGPDALLSTLSPWLQGESPALKYPPAADETLTERHQKLIARIDQLKAQWLEA
AGELHALISDSGVDKRSYSSKHLPNWLEKIGQWAQEETQTYSVPKDLERFAQSTLEEKTK
KGVAPRHRLFEAIELFLAEPLSLRDLVIARALHEIRFATRKEKRLRAQLGFDDLLSRFDE
ALQQPAGPLLAQAIRGRYPVALIDEFQDTDPQQYRIFRTLYVGQPESALLLIGDPKQAIY
AFRGADIFTYMKARAEVSAHYTLDTNWRSSPAMVDSVNQLFSRLDNPFLFQEIPFLPVQA
ATANSELRFTLDGAEQPALRFWLQPGSGVGVSEYQQFMARQCAAEIRHWLSSGQQQQALI
GKGDKMRPVQASDITILVRSYGEAAVMREALNALNIPSVYLSNRDSVFTTPEARELLWLL
QAVLAPEQERAVRSALATSIMGLDAPTLEGLSQDERAWNQLVDEFDGYRQLWLKRGVLPM
LRELMVSRHIAENLLVSESGERRLTDLLHLGELLQEAAAQLDSEHALVRWLSQQIAQPNS
QAANQQLRLESDRHLVQIVTIHKSKGLQYSLVWLPFVANFREAEQGIYHDRQTFQALLDL
NGDEESQQLAEQERLAEDLRLLYVALTRSVWHCSIGIAPLVKGNRKKEGSSDLHKSALGF
LLQRGEEADSEQLLAILQQTTSQAIALTTEAVTDESPWLPEMQDNQPLSSEVINRSLRDE
WRVTSYSGLQQHGPAMTLDLLPRFDVDAAGEAGEVSEPTLTPHSFPRGASPGTFLHGLFE
NIDFTQPVETGWLQQQLQQAGYDEIWLPMLQQWMTRIMATPLDDSGVSLNQLAPQQKQVE
LQFYLPIDAMLTAPALDQLIRQHDPLSAQAPPLAFHQVRGMLKGFIDLVFCWQGKYYLLD
YKSNWLGEESAAYTPQAMEQAMISHRYDLQYQLYTLALHRYLRHRLADYDYQRHFGGVLY
LFLRGVDGSASDNGVFHTRPSVEFVEALDNLFAGSIQEATCQS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatccgattccgcagcggctcgatccgctaaccctgccactgactggcgagcgg
ctgattgaagcctctgcgggaaccggtaaaacctttaccatcggcctgctctatctgcgg
ctgttgctgggattagggcagagtgccgcttatccacgtccgctgtcggtggaagagatt
ctggtggtaacctttaccgaagcggccaccgccgagctgcgtggccgtatccgtcataat
attcatgaattgcgtatcgcctgcgtgcgaggcgtcagtcagaatccgatgctggcgcag
ctacttagccaaatcgacgatctgtcgcaggctgctgcgatgctgctggccgccgagcgg
caaatggatgaagcggcaatttttaccatccacggtttctgccagcgcatgcttaacctc
aatgcgtttgagtccggaatgctttttgaacagcagctaatcgaagatgagcatgcgttg
cgcaagcaggcgacggcagatttctggcgacgccactgttaccccttgccgctggcaatt
gcgcaggtggtggctgagcagtggagcgggcccgatgcgttgctgtcaacgctctctccc
tggcttcagggagagtccccggcgctgaaatatccgccagcggcagatgaaaccctgact
gagcgtcatcaaaagctgattgcccgtatcgaccagttgaaagcgcaatggctggaggcg
gccggtgaactgcacgcgctaatcagcgattccggagtggataaacgcagctatagcagt
aagcatttaccgaactggctggaaaaaatcggccagtgggcgcaggaagagacgcaaacc
tacagtgtgccaaaagatctggagcgctttgcccagagcacgctggaggagaaaacgaaa
aaaggtgtggcaccgcgccatcgcctgtttgaggcgattgaactatttcttgccgaaccg
ctgtcgttacgcgatctggttattgcccgcgctctgcatgagatccgctttgccacccgc
aaagagaagcggctgcgcgcccagctcggatttgatgatttactcagccggtttgacgaa
gcattacagcaacccgctggcccattgttggcacaggcgattcgtggccgttatccggtg
gcactcattgatgaattccaggataccgacccgcagcagtaccgtattttccgcaccctg
tatgtcggccagccggagagtgcgctgttactgattggcgacccgaaacaggcgatctac
gcctttcgtggtgcggacatctttacctatatgaaagcgcgcgcagaagtgagcgcgcac
tatacgctggacactaactggcgctcatcaccagccatggtcgacagcgtcaaccagctg
ttttcgcgtctcgataatccatttttatttcaggaaatcccgtttctaccggtgcaggcg
gcgacggcaaacagtgaactgcgctttactcttgatggtgcagaacaaccggcgctgcgc
ttctggcttcagccgggcagcggcgtcggcgtcagtgaatatcagcaatttatggcgcgc
cagtgcgccgctgagattcgccactggctgtcgtcgggtcagcaacagcaagcgctgatc
ggcaaaggcgacaagatgcgtccggtgcaggcctccgatattacgattctggtgcgcagc
tacggcgaagcagcagtgatgcgtgaggcgctgaatgcgctaaatattccttcggtgtat
ctctccaatcgcgacagtgtgtttaccacgccggaagcgcgtgagctgctgtggctgttg
caggcggtgctggcaccggaacaggagcgagcagtgcgcagtgcgctggcgaccagcatt
atggggctggatgcgccaacactggaggggctgagtcaggatgagcgcgcctggaaccag
ttggtggatgagtttgatggttaccgtcagctgtggctgaaacgtggcgtgctacccatg
ctgcgcgagctgatggtgtcgcgccatattgccgaaaatctgctggtgtctgagagtggc
gaacgtcggttgaccgacctgctgcatctcggcgaactgttgcaggaagccgcagcacag
ctcgacagcgaacacgcgctggtgcgctggctgtcgcagcagattgcacaaccgaacagt
caggcggcgaaccagcagttgcgcctcgaaagcgaccgccatctggtgcaaattgtcact
attcacaagtcaaaaggtttgcagtattcgctggtatggctgccgtttgtcgccaatttt
cgcgaagcggagcagggaatttatcacgatcgtcaaacttttcaggcgctgctggattta
aacggtgatgaagagagtcagcaactggctgagcaggagcgactggcggaggatttacgt
ttgttatacgtggcgctgacgcgttcggtatggcattgcagcatcggtattgcgccgctg
gtaaaaggaaatcgtaagaaagagggcagcagcgatctgcataaaagcgctctcggcttt
ttgctgcagcgcggtgaggaagcggacagcgaacagctgctggctatcctgcaacagact
accagtcaggcgattgcgctgacgaccgaagcggtaaccgatgaatcgccctggctgcct
gaaatgcaggacaaccagccgttaagcagcgaggttatcaaccgatcgctgcgtgacgag
tggcgtgtcaccagttattccggtctgcaacagcacggtccggcgatgacgctggatctg
ctgccgcgttttgacgttgatgccgccggcgaggcgggtgaggtcagtgagccaacactt
actccgcatagctttccgcgcggcgcttcgccgggaacatttcttcacggcctgtttgag
aatatcgattttactcagccggttgaaaccgggtggttgcagcagcagttgcagcaggcg
ggttatgacgagatatggctgccgatgctgcaacagtggatgacacgtattatggcgaca
ccgctggatgacagcggcgtcagcctgaatcagcttgcaccgcaacagaagcaggttgag
ctgcagttttacctgccgattgatgccatgctgaccgcgcctgcgctggatcaattgata
cgccagcatgatccactgtcagcacaggcacccccactggcttttcatcaggtgcgcggc
atgctgaaaggttttatcgacttagtattctgctggcagggaaaatactatctgctggat
tacaaatccaactggctgggggaggagagtgctgcctataccccgcaggcgatggagcag
gcaatgatttcccatcgctacgatctgcaataccagctgtataccctggcgctgcatcgt
tatctgcgccaccgactggctgattatgattatcagcgccactttggcggtgtgctgtat
ctgtttttacgcggtgttgatggcagcgccagcgacaacggcgtattccacactcgtccc
tcggtggagtttgtcgaggcgctggataacttgtttgccggctccattcaggaggcgaca
tgtcagagttaa
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integrated database retrieval system
