Erwinia tracheiphila: LU633_00965
Help
Entry
LU633_00965 CDS
T07827
Symbol
sctE
Name
(GenBank) type III secretion system translocon subunit SctE
KO
K13285
invasin B
Organism
etp
Erwinia tracheiphila
Pathway
etp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
LU633_00965 (sctE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etp02000
]
LU633_00965 (sctE)
Transporters [BR:
etp02000
]
Other transporters
Pores ion channels [TC:
1
]
LU633_00965 (sctE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
Sec8_N
CCDC113_CCDC96_CC
TMEM120A-B
T3SSipB
Goodbye
PAS
Motif
Other DBs
NCBI-ProteinID:
UIA96674
LinkDB
All DBs
Position
187131..189002
Genome browser
AA seq
623 aa
AA seq
DB search
MEIKSKELNWLEQLTVASEEVSNDELKKQSNQAKRIANTAFKNHTHAEAVKDALNVLQPQ
ELLYILKNTQSALVGMGGSVSFEQQDAPQLQKPQPALATARNIGTDTGTSKSSLTANAQF
IELIGRVIELNQQGSVQNQIAKLNMFNAIFSGTVTQFNELAEELTSLGQAYANLQDTYDA
SSEKSTALKNELTNAQNKLKEKQNVLKKLEAQATKYNPVPASLQQQISEAKNAVTVAAAA
VTDAEKKYTNYVTGPLNHAEAAMNQAKIALNEAISRSRALLQGLPAQMVNTVEAHRQEQS
ENNLTLEFLMALMHQLIAQTTNKELSAAAKLKQDLAEASVRSAEKKDIEYKEQVRKAEEM
QKTMSCVGKILGWIITTVSFAAAIFTGGASLAIAAVGLALALADEIHQAVTGVSFMQQAM
QPILEKVVLPLMNFIAQQISLVLVKVGVDKEIADRVGQIMGAIYAAAAMIAAMVVAGAVV
GKVAAVVGRKMMNNIVGQTVKRMMQNISKKLMSSLNNSSTKFAQSLNRVNRAINVMSFAN
EGISVGLNISTSIMMVDAEKIKAALIKLMTMQEILDKFLENIIDTFSKKIELLNKTFENL
TDTLKQQAKTGKFIANRIGIVAV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaaagcaaagaattgaactggcttgaacagcttacagtggcctcagaggaa
gtgagcaatgatgagttaaaaaagcagtccaatcaggcaaagcgaattgctaatactgcg
tttaaaaatcacactcatgctgaagctgttaaggatgcgttgaatgtattgcaaccccag
gagctgctgtatattttgaaaaacacgcaatctgcgttagtgggaatgggaggcagtgtt
agttttgagcagcaggacgctccccagctgcaaaagccacagcctgcattggctaccgca
agaaatatcggcacggatacaggcaccagcaaatcttcattaactgcgaacgcgcagttt
attgaactgataggccgagtgattgagcttaaccagcagggatctgtgcaaaatcagatc
gcgaagcttaacatgtttaatgccatattttcaggaaccgtaacgcaattcaatgaatta
gctgaagaactcactagtttggggcaggcatatgctaatttgcaggacacctacgacgct
tcatcggaaaaatcaacagcattaaaaaatgagttaaccaatgcgcaaaacaaacttaaa
gaaaagcagaatgtgttaaaaaagctggaagcacaagcgaccaaatataatccggtccct
gcgtcgctacaacagcaaatttctgaagctaaaaatgcggttaccgtggcggcggcggcg
gtcactgatgcagagaaaaaatatactaattatgtgacaggtccattaaaccatgctgaa
gccgccatgaaccaggccaaaatagcactcaatgaggctatcagtcgctcacgggcttta
cttcaggggctgccagctcagatggtaaatacggttgaggcgcatcgtcaggaacaaagt
gaaaataatcttacactggagtttcttatggcattaatgcatcaactcattgcacaaacg
acaaataaagaattgagtgcggcagcaaaacttaagcaggatctggctgaagcctcagta
agaagtgctgaaaagaaagatattgaatataaagagcaggtacgcaaagcggaagaaatg
caaaaaacgatgtcctgtgtgggcaaaattttgggttggattattaccaccgtgagcttt
gccgcagcgatatttaccggcggggcatcgctggcaattgcagcagttgggctggccctt
gctctggctgatgaaattcaccaggcggtgacgggagtgtcatttatgcagcaggctatg
cagccaatattagaaaaagttgttttgcccttaatgaattttatcgcgcaacaaatcagt
ctggtgcttgttaaggtcggtgtagataaggaaatagccgatcgcgtggggcagataatg
ggtgccatttatgccgccgccgccatgatcgcagcaatggttgttgctggagccgttgtc
ggtaaagtggcggctgtagtgggaagaaaaatgatgaacaatattgtgggtcagacagta
aaacgcatgatgcaaaatatcagtaagaaattgatgtcatcgttaaataatagttcaacc
aaatttgcacagtctctaaacagggtgaacagagcaataaacgttatgtcatttgctaat
gagggaatttctgttggattgaatataagcaccagcattatgatggtcgatgccgaaaaa
attaaggcggctttaatcaaactcatgaccatgcaggaaattctggacaaatttctagag
aatattattgatacattttctaagaaaatagagttattaaataaaacctttgaaaactta
actgatacgcttaaacaacaggcgaaaacagggaagtttattgccaatagaataggtata
gtagcggtttaa
DBGET
integrated database retrieval system
