Erwinia tracheiphila: LU633_03935
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Entry
LU633_03935 CDS
T07827
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
etp
Erwinia tracheiphila
Pathway
etp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU633_03935 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etp03019
]
LU633_03935 (pnp)
03016 Transfer RNA biogenesis [BR:
etp03016
]
LU633_03935 (pnp)
Enzymes [BR:
etp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LU633_03935 (pnp)
Messenger RNA biogenesis [BR:
etp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LU633_03935 (pnp)
Transfer RNA biogenesis [BR:
etp03016
]
Prokaryotic type
tRNA degradation factors
LU633_03935 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
S1_RRP5
KH_2
KH-I_KHDC4-BBP
Spt6_S1
UPF0181
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
UIA97139
LinkDB
All DBs
Position
758392..760521
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AA seq
709 aa
AA seq
DB search
MLNPIVKKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKNAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELLESKLDLVVA
GMQGAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIENINALVAEAGKPRWNWQPEAVNE
SLYSRISVLAESRLSDAYRITEKQQRYAQVDVVKSEVTAALLAEDVSLDEAEIGDILHSL
EKSVVRSRILRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQSLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKGDV
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISPDKIKDVIGKGGSIIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKYAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEAISPAQSEAGAVSNLEAE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgattgttaagaaattccagtatggtcagcatactgtcactcttgagaca
ggtatgatggctcgtcaggcaacggccgctgtaatggtgagcatggacgataccgcggta
ttcgttaccgtggttggtcagaaaaatgccaagcctggccaggactttttccctttaacg
gtgaattatcaggaacgtacctatgcggcaggccgtattcctggaagctttttccgtcgt
gaaggtcgccccagtgaaggcgaaacgcttacggcgcgtttgattgatcgtcccgtccgg
ccacttttccctgaaggcttcgttaacgaagttcaggttattgccaccgtagtttcagtt
aatcctcaggttaacccggatattgttgcaatgattggggcatctgctgcattgagcctt
tctggtatcccttttaacggtccaatcggtgctgctcgcgtaggttacatcaacgatcaa
tacgtacttaacccaactgctgatgaattgttggaaagcaaattagatctggttgttgca
ggtatgcagggtgctgtactcatggttgaatctgaggctgaattgctcagtgaagatcag
atgctcggtgcagtcgtatttgggcacgatcaacagcaggtcgtcattgaaaatatcaat
gctctggttgctgaagcgggtaaaccacgctggaattggcaaccggaagcggttaatgag
tcactttattcccgcatttctgttctggctgaatctcgtttgagcgatgcttatcgtata
accgaaaaacagcagcgttatgcccaggttgatgtggttaagtcagaggtcactgctgca
ctcttagccgaagatgtgtcattagacgaagcagaaattggtgatattctgcactcttta
gaaaagagcgtagtacgtagtcgcattctacgtggtgaaccccgtattgatggtcgtgaa
aaagacatgattcgtggtctggatgttcgcacaggcgtattaccacgtactcatggatct
gcgttgtttacccgtggagagactcaggcgctggttactgcgacattaggcactgcccgt
gatgcgcagagtctggatgagttaatgggagagcgcactgacagcttcctgttccactat
aatttccctccatactccgttggtgaaacaggtatggttggttcgcctaaacgtcgtgaa
attggtcatggacgtctggcaaagcgcggcgtgctggcagtaatgcctaaaggtgatgtt
tttccttataccgttcgtgttgtttctgaaattactgagtcaaatggttcatcttcaatg
gcatcggtttgcggagcatccctggcattgatggatgctggcgtgccaattaaagcagcc
gttgcaggtatcgcaatggggctggtaaaagaaggtgacaactttgtcgtcctgtctgac
attctgggtgatgaagatcatttaggtgacatggattttaaagtagcaggtagccgtgaa
ggtatttctgcgctgcaaatggatattaaaattgaaggtattacccgcgaaattatgcaa
gtagcccttaatcaggctaaaggtgcacgtttgcatatacttggtgtaatggaacaagct
attagcacacctcgtggtgatatttccgaatttgctccacgtatccatacgattaagatc
agtccggacaaaattaaagacgtgatcggtaaaggtggctcgattattcgcgcattgaca
gaagaaacaggcactaccattgaaattgaagatgatggtacggttaaaattgctgctacc
gatggtgataaagctaagtatgccatccgtcgaattgaagagatcaccgctgaaattgaa
gtaggacgcgtttacagtggtaaggtaactcgtatcgttgattttggtgcatttgtcgcg
attggtggcggtaaagaaggactggtgcatatttcgcaaattgctgataaacgtgttgaa
aaagtcactgattatttgcaaatgggtcaggaagttccggttaaggtgctggaggttgat
cgtcagggtcgtgtacgcctgagcatcaaagaagcaatctctccagctcaatctgaagca
ggagctgtgtcaaatctggaagcagaataa
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