Erwinia tracheiphila: LU633_04920
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Entry
LU633_04920 CDS
T07827
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
etp
Erwinia tracheiphila
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etp03016
]
LU633_04920 (thpR)
Enzymes [BR:
etp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LU633_04920 (thpR)
Transfer RNA biogenesis [BR:
etp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LU633_04920 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UIA97289
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All DBs
Position
complement(964370..964909)
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AA seq
179 aa
AA seq
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MSERKRLFFAISLPEESSTRIVAWRAQSFAKEAGRPIASANLHLTLAFPGDVSHERSLAL
QRLAAKIKQPGFVLTLDDAGHWPRSGIVWLGPKRSPRGLLQLAEMLRAQAARCGCYQSPG
PFHPHITLLRNAIRPVALPPRNFHWSFYVERFSLFESVFPRGRTVYKALAEWNLEKETR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacggaaaaggctgttttttgccatcagtctgccagaggaaagcagcacacgt
atcgtagcgtggcgggcgcaaagctttgccaaggaagcaggtcgtccgattgcgtcagcg
aatttgcatcttaccctggcttttcccggtgatgtcagtcacgagaggtcgctggcacta
cagcggctggcagcgaagattaaacagcccggcttcgtactcacgctcgatgatgccgga
cactggccacgttccggcatcgtgtggctgggaccaaaacgttctcctcgcgggctgttg
cagctggcagaaatgctgcgtgcacaggccgcccgctgtggctgttatcaaagtccaggt
ccgtttcatccccatattaccctgttgcgtaatgccatccggccagtcgcgctccctccc
cgcaattttcactggtcgttttacgttgaacgtttttcactatttgagtcagtttttccc
cgtggccgcaccgtgtataaggcactggcagagtggaacctggagaaggaaacgcgatga
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