Erwinia tracheiphila: LU633_07840
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Entry
LU633_07840 CDS
T07827
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
etp
Erwinia tracheiphila
Pathway
etp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LU633_07840 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etp03400
]
LU633_07840 (nfo)
Enzymes [BR:
etp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LU633_07840 (nfo)
DNA repair and recombination proteins [BR:
etp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LU633_07840 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UIA97744
LinkDB
All DBs
Position
complement(1501960..1502802)
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AA seq
280 aa
AA seq
DB search
MKFIGAHVSAAGGVDQAVVRAHELEATAFALFTKNQRQWRAAPLTSEVIVAFRSACEKYH
YQPGQILPHDSYLINLGHPVHEALEKSRDAFIDEMSRCQQLGLSLLNFHPGSHLHQIDED
TCLQRIAGSINIALDKTAGVTAVIENTAGQGSNLGFRFEHLAAIIEGVEDKSRVGVCIDT
CHAFAGGYDLRTEEECVKTFAEFDRVVGFRYLRGMHLNDAKSAFASRVDRHDSLGAGNIG
KTVFSWLMKDSRFDGIPLILETINPDIWKDEIAWLKSEQH
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcggcgctcacgttagtgcagccggcggcgtggaccaggcggttgttcgc
gcccatgaactggaggcaaccgcctttgcactttttactaaaaatcagcgccagtggcgt
gcggctccgctcaccagcgaggtgattgtcgcgtttcgctctgcctgtgagaaatatcac
taccagcccggacaaatcctgccacatgacagctacctgattaatctgggacatcctgtt
catgaggcgctggagaaatcccgtgatgcctttattgatgaaatgagccgctgccagcag
cttggtctttcgctacttaatttccatcccggcagccatctgcaccagattgacgaagac
acctgcctgcaacgcatcgccgggtcgatcaatatcgctctcgacaaaacagcaggcgtg
accgccgtcattgaaaacaccgccggccagggcagcaatctgggttttcgctttgagcac
ctggctgcgatcatcgaaggcgtagaggataaatcgcgcgttggggtatgtattgatacc
tgtcacgcctttgccggcggttacgatttgcgcaccgaagaggaatgtgtgaaaaccttt
gccgaattcgatcgggttgtcggctttcgttatttacgcggaatgcatctcaacgatgcc
aaaagcgcgttcgccagccgggtagatcgccatgacagtctgggggcaggaaacataggt
aaaacggtattcagctggttgatgaaagacagccgctttgacgggattccgctaatcctg
gagacaatcaatcccgatatctggaaagatgaaattgcctggctgaaatccgaacaacat
taa
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