Erwinia tracheiphila: LU633_09185
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Entry
LU633_09185 CDS
T07827
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
etp
Erwinia tracheiphila
Pathway
etp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LU633_09185 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etp03400
]
LU633_09185 (sbcB)
Enzymes [BR:
etp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LU633_09185 (sbcB)
DNA repair and recombination proteins [BR:
etp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LU633_09185 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU633_09185 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LU633_09185 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UIA97939
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All DBs
Position
complement(1744422..1745849)
Genome browser
AA seq
475 aa
AA seq
DB search
MKDQQIQPSFLFHDYETFGQSPSLDRPAQFAAVRTDMDFNIIGEPEVFYCQPGDDYLPQP
EAVMITGITPQAARAKGITEAAFARRIHQLFSKPGTCIVGYNNVRFDDEVTRNLMYRNFH
DPYGWSWQHGNSRWDLLDVMRACYALRPDGIEWPENDDGFPSFRLEHLTNANGVAHQNAH
DAMSDVWATIAMAKLVKEKQPRLYDFLFSHRNKQKIMHLVDIPQMKPLVHISGMFGVFRG
NTSWIAPLAWHPVNKNALIVCDLAGDMTPLLELDSDALRTRLYTRREQLADSSPVPVKLL
HINKCPVVAPANTLRPDDAKRLGISRQRCLDNLALLRKHPEIREKVVAVFVGTEPFTPSN
NVDAQLYDGFFSDADRTAMNIIQQTTPEHLPALDLTFNDPRIAKLLFRYRARNFPGTLDE
AEQLRWLQHRRDMLSPERVRDYVERLESLFVQYEGDKSRIVQLKALFDYARELVS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaccagcaaatacagccaagcttcctcttccacgattatgagactttcggccaa
agcccgtctctggaccgccctgcccagttcgcggctgttcgtacggatatggacttcaac
attatcggtgagccggaagtattttactgtcagcctggggatgactatctcccgcagcct
gaagcggtaatgatcacaggtattacgcctcaggccgcacgggcaaaaggaataaccgaa
gccgccttcgctcgacgtatccaccagctctttagtaaaccgggaacctgcattgtcggc
tataacaatgttcgcttcgatgatgaagtcacgcggaatctgatgtaccgcaatttccac
gacccttatggctggagttggcaacatggcaacagccgttgggacctgctggacgttatg
cgcgcctgttatgctcttcgccctgatggcattgaatggccagaaaatgatgatggtttt
cccagtttccgtctggagcatctcactaacgctaatggtgttgcacatcagaacgcgcac
gatgccatgtctgacgtctgggccaccatcgccatggcaaaattggtgaaagagaaacag
ccccgcctttacgactttctttttagccatcgcaacaagcaaaaaatcatgcatctggtg
gatattccacagatgaagccgctggttcatatctcaggtatgttcggcgtatttcgcggc
aacaccagctggatcgctccactggcctggcatccggtgaataaaaatgccctgattgtc
tgtgatttagccggtgatatgaccccactgctggagctggactccgacgcgttgcggacg
cgtctgtatacgcgacgcgagcagctggcagactcgtctccggtacctgttaagctgctc
cacatcaacaaatgcccggtggtcgcgcctgctaataccctgcgcccggacgatgccaaa
cggcttgggatttcccgtcagcgctgtctggacaaccttgctttattacggaagcacccg
gagattcgtgaaaaggtagtggctgtatttgtcggtacagagccattcaccccttcaaat
aatgtggacgcgcagctttatgacggttttttcagcgacgcagaccgcaccgcaatgaat
attattcagcagactacgccggagcatttgcccgcgctggatctcaccttcaacgatcca
cggattgcaaagctgctttttcgctatcgcgcacgtaatttccccggcacgctggatgag
gcagaacaacttcgctggctgcagcatcgccgtgacatgctcagccctgaacgggtacgg
gattatgttgaacggcttgaaagcctgtttgtgcagtatgaaggggataaaagcagaata
gttcagttaaaggcgttatttgactatgccagggagctggtttcataa
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