Erwinia tracheiphila: LU633_15890
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Entry
LU633_15890 CDS
T07827
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
etp
Erwinia tracheiphila
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etp03009
]
LU633_15890 (rimO)
Enzymes [BR:
etp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LU633_15890 (rimO)
Ribosome biogenesis [BR:
etp03009
]
Prokaryotic type
ribosomal protein modification factors
LU633_15890 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UIA95025
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Position
3017549..3018877
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AA seq
442 aa
AA seq
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MSQNTTMAPRVGFVSLGCPKNLVDSERILTELRTEGYDVVPRYDDAEIVIVNTCGFIDSA
VQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPRVLEITGPHSYEQVLSHVHKYVPK
PQHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVEAGVKELLVISQDTSAYGVDVKHRTGFWNGSPVKTSMVSLCEQLAKLGVWVRLHYVY
PYPHVDEVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGAVERTLERIRRWRKICPDLT
LRSTFIVGFPGETEEDFQMLLDFLREARLDRVGCFKYSPVEGAGANQLPDPVPEAVKEER
YDRFMQLQQAISASRLQEKVGREILVIVDEVDEEGAIGRSMADAPEIDGAVYLNGEKHVK
PGDVIRACVDNADEYDLWATKI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaataccacaatggcgccccgcgttggttttgtctcgctgggttgcccaaag
aatcttgttgattcagaaaggatcctgaccgaattacgcaccgagggatacgatgtcgta
ccgcgctatgacgatgcggaaattgtcatcgtcaacacctgtggctttatcgacagcgcg
gtgcaggagtcgctggaagccatcggcgaagcgttgaatgaaaatggcaaagtgattgtc
accggctgcctgggcgcaaaagaaaaccaaattcgtgaggtgcatccgcgggtgctggaa
atcaccgggccacacagttacgaacaggtcctttcgcatgtccataaatatgtgcctaag
cctcagcataacccgtttctgagtctggttcctgagcagggcgtaaaactgacaccgcgc
cactatgcttatctgaaaatttctgaaggctgcaaccatcgctgcacgttctgcatcatt
ccctcaatgcgtggcgatctggacagccgtccgattggctccgtccttgatgaggcaaaa
cgtctggtggaggccggggtaaaagagctgctggtcatctcacaggatacgtctgcatac
ggtgttgatgtgaaacaccgcaccggattctggaacggttccccggtaaaaaccagtatg
gtcagcctgtgcgaacagctggcgaaactgggtgtctgggtacgtttacactatgtctac
ccctacccgcacgttgatgaggttattccgctgatggcagaaggaaaaatcctgccgtac
ctggatattcctctgcagcacgccagcccgcgcattctgaagctgatgaagcgaccgggg
gcggttgagcgcactctggagcgcatcaggcgctggcggaaaatctgcccggacctgacc
ctgcgttccacctttatcgttggctttccgggtgaaaccgaagaagactttcagatgctg
ctcgactttctgcgggaagcgcggcttgacagggttggctgcttcaaatacagcccggtg
gaaggtgcaggcgctaaccagctgccggacccggtgccagaagcagttaaagaagaacgt
tacgaccgctttatgcagcttcagcaggctatctctgccagccgcctccaggaaaaagtg
ggacgcgaaattctggtgattgttgacgaagtggatgaagaaggcgcgattgggcgcagt
atggccgatgctcccgagatcgacggagcggtttatctcaatggtgagaagcatgtcaag
ccaggcgatgtaatccgtgcgtgcgtcgacaacgccgacgaatacgatttgtgggccaca
aaaatctga
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