Erwinia tracheiphila: LU633_19440
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Entry
LU633_19440 CDS
T07827
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
etp
Erwinia tracheiphila
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LU633_19440
Enzymes [BR:
etp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
LU633_19440
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Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
NOMO1-like_2nd
SdrD_B
CarbopepD_reg_2
SpaA
Motif
Other DBs
NCBI-ProteinID:
UIA95570
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Position
3729640..3731358
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AA seq
572 aa
AA seq
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MMLVRFSLAALMLFSTCSYGVISPPVKLDISGMRAVLDNGLLRVEFNDDASMHTMTKNGH
NLVSSLSGAARDPSKNRSGYLDFHSDGVKDFIPERLEVIARNDDIAHIAWFNHPGSLLRL
EYHLIMRKGVSGIYSYVIAENTGDKNIKVSELRNVYRFNPGYLDHIFNGERDGKPYLYHE
LEAMPAIQDETWRLPDGSVWTKYDFAGYQRTTPFWGVYGKNSGVWLIHASGEYFSGDTLK
QDLMVHQDAIILNYLTGAHLGTPDMHAPPGWKKFYGPWLLYVNEGDKAHMLADARQQSDS
EKASWPYRWLNDAQYPVERTQVSGRVKTDKPVTLVLSSSIDEQFDLQTRGYLFSAVSDEQ
GNFQFEHVIPGDYQLIVYANSGTQPGLLVEKKMTVSGEKQWLDQISLPPAAKVIWAIGQS
DRQAKEFRFGNEQRNYRWQHEVPANLVFNVGHSDFSQEWYYAQTKPGNWDINFNLTPEKA
VYHLNIALAAASNSGMVKGRGSPSLTVKINGAELKTLTYENDKAVYRSALRNGQYHLATI
SVEKEQLRNGKNTLSLKLNGGSLMYDIITFTE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagttcgtttcagtctggctgccttaatgctgttttcaacctgcagctatggt
gttatttctcccccggtaaaactggacatatcgggaatgcgggcagtgctggataatggt
ttactgcgcgtcgagttcaacgatgatgccagcatgcatacgatgacgaaaaatggtcat
aatctggtgagttctctgtccggtgcggcacgcgatcccagcaaaaatcgcagcggttat
ctcgattttcactctgatggcgttaaagattttattccagaacgtctggaggtgatcgcg
cgaaatgatgatattgcccatattgcctggtttaatcatcccggcagcctgctgcggctg
gagtaccatcttattatgcgtaaaggcgtcagtggcatctatagctatgttattgcagaa
aataccggggataaaaatataaaagtcagtgagttacgtaatgtttatcgctttaacccc
ggctatctggaccatatttttaatggtgagcgtgacggtaaaccttatctctaccacgag
ctggaggctatgccggccattcaggatgaaacctggcggctcccagacggaagtgtctgg
acaaaatatgattttgccggttatcaacgcaccacgccgttctggggcgtttacggaaaa
aatagcggagtatggctgatacatgccagtggtgaatatttttccggtgatacactcaag
caggatctgatggtgcatcaggatgccattattttaaattacctgaccggtgcacattta
ggcacgccagatatgcacgccccgccgggatggaaaaaattctatggcccgtggttactc
tacgtgaatgaaggcgataaagcgcacatgctggcggatgcccggcagcagtccgatagt
gaaaaggccagctggccttatcgctggctcaatgatgcgcaatatcctgttgaacgcacg
caggttagcggtcgtgttaaaacggacaagcctgttacgttggtgctctcttcctcaatt
gatgagcaatttgacttacaaacacgcggctatctcttttctgcggtttccgatgagcag
ggaaatttccagtttgagcacgttattcccggcgattatcagcttattgtttatgccaat
tccggcacgcagcccggcttactggttgaaaaaaaaatgacggtttctggcgaaaagcag
tggctggatcaaatcagcctgccgcccgcagcaaaagttatatgggcaatcgggcagtct
gatagacaggcaaaagaattcagatttggtaatgagcagcgtaattatcgctggcagcat
gaggttccggcgaatctggtttttaatgtcggacacagtgatttcagtcaggaatggtat
tatgcacaaaccaaacccggcaactgggatattaatttcaacctgacaccagagaaagcc
gtttatcaccttaatattgccctggccgccgccagtaatagcggcatggtaaaaggtcgc
ggttcgccttcgttaaccgtaaaaataaatggtgcagaattaaaaacgctgacttacgag
aatgataaagcagtatatcgaagtgcactgcgcaatggtcagtaccatctggcgactata
tctgtcgaaaaagagcagttacgtaacggaaagaatacgctgtcattgaagctaaacggc
ggcagcctgatgtacgatattattacctttacggaataa
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