KEGG   Erwinia tracheiphila: LU633_20355
Entry
LU633_20355       CDS       T07827                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
etp  Erwinia tracheiphila
Brite
KEGG Orthology (KO) [BR:etp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:etp02044]
    LU633_20355 (tssC)
Secretion system [BR:etp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LU633_20355 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 SH2_2
Other DBs
NCBI-ProteinID: UIA95712
LinkDB
Position
complement(3897194..3898696)
AA seq 500 aa
MSNPSQQQQPQEQQGAWAGDEFSALLNKEFRPKTDSARSAVESAVKTLAQQALENTVTVS
TDAYRTIQALIAEIDEKLSKQVNEIIHHDDFQKLEGAWRDLSYLVNNTETDEMLKIRFMS
ISKQELGRTLKRHKGVGWDQSPIFKKIYEEEYGQFGGEPFGCLVGDYYFDHSPQDVELLG
EMARIGAASHCPLITGTAPGVMQMESWQELANPRDLTKIFQNSEYAAWRSLRESEDARYL
GLVMPRFLSRLPYGIRTNPVDSFDFEEETDGANHSNYTWTNAAYAMAANINRSFKEYGWC
TSIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSD
FAAFIGAQSLQKQAEYHDPDATANARLAARLPYLFACCRFAHYLKCIVRDKIGSFRERDE
MERWLNDWVMNYVDGDPVNSSQETKSRKPLASAEVQVEEIEDNPGYYAAKFFLRPHYQLE
GLTVSLRLVSKLPSLKADNA
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgagcaacccatcacagcagcaacagccgcaggaacagcagggtgcctgggcaggggat
gagttcagcgcgctgctgaacaaagaattccggccaaaaaccgactctgcccgctcggca
gtggaaagcgcggtaaaaacgctggcccagcaggcgctggaaaataccgtcactgtttcc
accgatgcctaccgcactattcaggcgctgatcgcagaaatcgatgagaagctttctaaa
caggttaacgagattatccaccacgatgatttccagaagctggaaggtgcctggcgtgac
ctgagctatctggtcaataacaccgaaaccgacgagatgctgaaaattcgctttatgagc
atctccaaacaggaactgggccgcaccctgaaacgccacaaaggcgtgggctgggaccag
agcccgattttcaaaaaaatctacgaagaagagtacggccagttcggcggcgagccgttt
ggctgcctggtgggcgattactacttcgaccacagcccgcaggatgtggaactgcttggc
gaaatggcgcggatcggtgcggcttcgcactgcccgcttatcaccggcaccgcgccgggt
gtgatgcaaatggaatcctggcaggagctggctaacccacgcgatttgaccaaaatcttc
cagaacagcgaatacgctgcctggcgcagcctgcgcgaatcagaagatgcccgctatctg
ggactggtaatgccgcgtttcctgtcgcgcctgccatacggcattcgcaccaatccggtt
gacagctttgatttcgaggaagaaaccgacggcgcgaatcacagcaactacacctggacc
aacgcggcctacgcgatggccgccaacatcaaccgctcctttaaagagtacggctggtgc
acctcgatccgcggcgtggagtcgggcggggcggtagaaaacctgccgtgtcataccttc
ccaagtgacgacggcggcgtggatatgaaatgcccgaccgaaatcgccatcagcgaccgc
cgcgaagccgaactggcgaaaaacggctttatgccgctggttcaccgcaagaactctgac
tttgcggcatttatcggcgcgcagtcgttgcagaaacaggcggaatatcacgacccggat
gccactgcgaacgcacgtctggccgcgcgtctgccgtacctgtttgcctgctgtcgtttt
gcgcactacctgaagtgcattgtgcgtgacaagattggttctttccgtgaacgcgatgaa
atggagcgctggctgaacgactgggtaatgaattacgtcgatggtgacccggtcaactct
tcacaggaaaccaaatcccgcaagccgctggcttctgctgaagtgcaggtggaagagatt
gaagacaaccccggctactacgcggctaagttcttcctgcgcccgcactaccagctggaa
ggtctgaccgtctcgctgcggctggtgtccaaattgccgtcgctgaaagcggataacgcc
tga

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