Erwinia tracheiphila: LU633_22790
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Entry
LU633_22790 CDS
T07827
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
etp
Erwinia tracheiphila
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etp03400
]
LU633_22790 (sbcD)
DNA repair and recombination proteins [BR:
etp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LU633_22790 (sbcD)
Archaeal homologous recombinant proteins
LU633_22790 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UIA96114
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Position
4414468..4415691
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AA seq
407 aa
AA seq
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MRIIHTADWHLGQFFYTKSRAAEHQAFLDWLLAQVTEQQADAIIVAGDIFDTGSPPSYAR
ELLNRFIVRLQPTGCQLVLLGGNHDSVAVLNESRHLLACLNTTVVAAAAEQPDQQILRLN
NRHGQPAALLCAIPFLRPRDITTSQAGLSGLEKQQSLLEAITTHYQRCWQHALQQREEMK
LSVPVIATGHLTTVGVTQSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQRIAGTEH
IRYSGSPIPLSFDELGKEKSVFLVEFAGDKLHRVEPLVIPMFQPMQIIKGSLEEITRQLT
AIQPRPDGKVVWLDIEVVTDCWLNDLQRRIQEITHDLPVDIVLLRRSREQREQTIVRQDN
ETLSELSVEDVFARRLASEQDMSPQRLARITALFQQTLAEIDEEEQP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcataccgctgactggcatctgggccagtttttttataccaaaagccgt
gccgcagaacatcaggcatttcttgactggttgctggcgcaggtaaccgaacagcaggcg
gatgcgattatcgtcgccggggacattttcgataccggctcgccacccagctatgcccgc
gagctgcttaaccgctttattgtcaggctccagccaaccggttgccagctggttctgctt
ggcggtaatcatgattcggtggcggtgctgaacgagtcgcggcacctgctggcctgcctc
aataccaccgtggttgccgccgccgctgaacagccggaccaacagatattacgcctgaac
aaccgccacggtcagcccgcagccctgctctgcgccattcccttcctgcgcccgcgcgat
atcactaccagccaggctggcctgtctggtctggaaaaacagcagtctctgctggaggcc
atcaccacgcactatcagcggtgctggcaacacgcgctgcaacagcgcgaggagatgaag
ctgtctgttcccgtcattgccactggtcatctgaccaccgtcggcgtgacccaaagcgat
tcggtgcgcgatatttacatcggcacgctggatgcgttccccgctcaggccttcccgcca
gccgattacattgcactggggcatattcaccgagcccagcgcattgccggaacggagcat
attcgctatagcggctcgcccattcctctcagttttgatgagttgggtaaagaaaaaagc
gtctttctggtggagtttgccggggacaaactgcatcgggttgaaccccttgtcattccg
atgtttcagccgatgcaaatcattaaaggctcgctggaagaaataacacgtcagctgaca
gccattcagccgcgcccagacggtaaagtcgtctggctggatattgaggtggtcaccgac
tgctggctgaatgacttgcagcggcgcatccaggagataacgcacgatttgccggtcgat
atcgtgctgctccgccgcagccgcgagcagcgtgaacaaaccattgtgcgtcaggataat
gaaaccctcagcgaactgagcgtggaagatgtgtttgcgcgcaggctggcctccgagcag
gacatgtcgccccagcggctggcccgtatcaccgcgctttttcagcaaacgctggcagaa
attgatgaggaggaacagccatga
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