Erwinia tracheiphila: LU633_24115
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Entry
LU633_24115 CDS
T07827
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
etp
Erwinia tracheiphila
Pathway
etp00541
Biosynthesis of various nucleotide sugars
etp01100
Metabolic pathways
etp01250
Biosynthesis of nucleotide sugars
Module
etp_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LU633_24115 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
etp01005
]
LU633_24115 (rfaD)
Enzymes [BR:
etp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LU633_24115 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
etp01005
]
Core region
LU633_24115 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UIA96332
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Position
4658421..4659353
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDQGHTDILVVDNLKDGTKFANLVDLNITDYMDKEDFLIAV
LADEDFGDVEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERQIPFLYASSAATY
GGRNDNFIEERQFEQPLNVYGYSKMLFDHYVRQILPEAESQVCGFRYFNVYGPREGHKGS
MASVVFHLNTQLNNGENPKLFEGSDNFKRDFIYVEDVAAVNFWFWQNKVSGIFNCGTGRA
ESFQEVADAALHFHQKGEIEYIPFPEKLKGRYQAFTLADQSKLRAAGYDKPFKTVAEGVA
EYMAWLNRNV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggtggcgcgggatttattggaagcaatatcgtcaaggcgctcaat
gaccagggtcacaccgatattctggtggtcgacaacctgaaagatggcaccaaattcgcc
aatctggttgatctgaacatcactgattatatggacaaagaagatttcctgatcgcggtg
cttgctgatgaagattttggtgatgtcgaggcagtgttccatgaaggtgcctgctcttcg
accaccgaatgggatggcaagtacatgatggacaacaactatcagtactccaaagagctt
ctccattactgcctcgaacgtcagattcctttcctgtacgcgtcttctgcggcgacttac
ggcgggcgcaacgacaacttcattgaagaacgccagtttgaacagccgctcaacgtttac
ggctactccaaaatgttgttcgatcactacgttcgtcaaatcctgcctgaagcggaatca
caggtatgtggcttccgctacttcaacgtttatgggccacgtgaaggccacaaaggcagc
atggccagcgtggttttccatctcaacacccaattaaacaacggtgaaaatccaaaactt
tttgaaggcagcgataatttcaaacgtgattttatttatgtcgaagacgtggcggccgtc
aatttttggttctggcagaacaaggtttcgggcatctttaactgcggtaccggccgcgct
gagtctttccaggaagtggccgatgcagcattacactttcatcagaaaggggaaatcgaa
tacatcccgttcccggagaaattgaaaggccgctatcaggctttcacgctggcagatcaa
agcaaactacgtgcagctggctatgataagcctttcaaaacggtggctgaaggtgtggca
gagtacatggcctggctgaaccgcaacgtgtaa
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