Erwinia tracheiphila: LU633_24825
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Entry
LU633_24825 CDS
T07827
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
etp
Erwinia tracheiphila
Pathway
etp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LU633_24825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etp03019
]
LU633_24825 (recQ)
03400 DNA repair and recombination proteins [BR:
etp03400
]
LU633_24825 (recQ)
Enzymes [BR:
etp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LU633_24825 (recQ)
Messenger RNA biogenesis [BR:
etp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LU633_24825 (recQ)
DNA repair and recombination proteins [BR:
etp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LU633_24825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UIA96436
LinkDB
All DBs
Position
complement(4798257..4800080)
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AA seq
607 aa
AA seq
DB search
MSTAVVIDRETLVEKVLQETFGYQQFRPGQQTIIQASLEGRDCLVVMPTGGGKSLCYQIP
ALARDGLTLVVSPLISLMKDQVDQLLANGVSAACLNSTQTREEQQGVMACCRTGRIKLLY
IAPERLMMDNFLDSLLHWNLVMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPYVPVMAL
TATADETTRNDIVRLLQLHDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGMDNVHRAQVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRRCLEEKPGPLQ
QIESHKLNAMGAFAEAQTCRRLVLLNYFGEGRQLACGNCDICLDPPRRYDGLVEAQKALS
SIYRVGQRFGMGYIVEILRGANSQRIRDMQHDKLPVYGIGRDQSHEHWISVLRQLIHLGL
VTQNISMHSALQLTEAARPVLRGETPLMLAVPRMVSARPRYNSQKSFGGNYDRKLFARLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLTASEMLSINGVGQRKLERFGKPFMLVIR
EHVDAED
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggctgttgtgattgatcgggaaacactggtagaaaaggttttgcaggaaacc
ttcggctaccagcaattccgtccgggccagcaaaccattattcaggcttcgctggaagga
cgcgattgcctggtagtgatgccaaccggtggtggcaaatcgctttgctatcagatccct
gcactggcgcgggatgggctgacgttggtggtatcaccactgatctcactgatgaaggat
caggtcgatcagttactggccaacggtgtttctgccgcttgcctgaactccactcagacg
cgggaagaacagcagggcgtgatggcttgttgccgtactggcaggattaaattgttatac
atcgcacctgaacgactaatgatggataactttctcgatagcctgctgcactggaatctg
gtcatgctggcggtggatgaagcacactgcatctctcaatggggccatgatttccgcccg
gaatacggcgcacttgggcagctacgccagcgtcttccctatgtgcccgtaatggcgctg
accgccacggccgatgaaaccacccgcaatgatattgttcgcctgctgcaactgcacgat
cccttaattcaaatcagcagctttgaccgccccaatatccgttacacgctggtagaaaaa
ttcaagcctaccgagcagctgcttcgctatgtgcaggaccagcggggcaagtgcggcatt
atttactgcaacagccgcgcgaaagtagaggataccgccgcacgtctgcaaagccgtggc
ctcagcgtaggggcttaccatgccggaatggataatgtgcatcgtgctcaggtgcaggaa
gcctttcagcgtgatgatttgcaaatcgtggtggcgacggtggcctttggtatggggatt
aacaaaccaaacgtgcgctttgtggtgcattttgatattccgcgcaatattgaatcctat
tatcaggaaaccggccgtgccgggcgcgatggcctgcctgctgaagcaatgatgctttac
gatccggccgatatggcctggctgcgccgctgtctggaagaaaaacccgggccgctgcaa
caaattgaaagccacaagctgaatgcgatgggcgcattcgcggaagcgcaaacctgtcgc
cgtttggtgctgctgaattattttggcgaaggccgtcagcttgcctgcggcaactgtgat
atttgtcttgacccgccacgccgttatgacggcctggtggaagcacaaaaagcgctgtcg
agtatctatcgtgtcgggcagcgttttggcatgggctatattgttgagattttacgtggg
gccaatagccagcgtatccgtgatatgcagcatgacaagttaccggtttatggtattggt
cgcgatcaaagccacgaacactggatcagcgtgctgcgccagctgatccacttaggtctg
gttacacagaatatttctatgcactctgcgttacagttgactgaagcagcgcgtccggtg
ttgcggggcgaaacgccgctaatgttggctgtgccgcgtatggtcagcgcccgaccgcgt
tataacagtcaaaaatcctttggtggcaactatgatcgcaaactgtttgcccgattgcgc
aagctgcgtaaagccattgctgatgaggaaaacattccgccttatgttgtgtttaacgat
gccactttgattgaaatggcagaacaaatgccccttactgcatcagaaatgttgagcatt
aatggcgtggggcagcgcaagctggagcgttttggcaaaccttttatgctggttatccgt
gagcatgtggatgctgaggattag
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