Erwinia tracheiphila: LU633_24855
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Entry
LU633_24855 CDS
T07827
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
etp
Erwinia tracheiphila
Pathway
etp03420
Nucleotide excision repair
etp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
etp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LU633_24855 (uvrD)
03430 Mismatch repair
LU633_24855 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etp03400
]
LU633_24855 (uvrD)
Enzymes [BR:
etp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LU633_24855 (uvrD)
DNA repair and recombination proteins [BR:
etp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LU633_24855 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LU633_24855 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
UIA96440
LinkDB
All DBs
Position
complement(4804577..4806739)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPSSIMAV
TFTNKAAAEMRHRIGQLVGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDTEDQL
RLLKRLIKAMNLDEKQWPARQAMWYIGGKKDEGLRPKHIESYGNPVEQIWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFSNILVDEFQDTNNIQYAWIRLLAGET
GNVIIVGDDDQSIYGWRGAQVENIQRFLNDFNGAQTIRLEQNYRSTNNILKAANALISNN
NGRLGKELWTDGSDGEPIALYCAFNELDEARFVVNRIKVWMENGGALNDCAILYRSNAQS
RVLEEALLQTSMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPVRGIGD
RTLDVVRQTARERKLTLWQTARALLQEKVLAGRAAAALQRFTELVDSLAYETSELPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVNATRQYSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFMQVFIVGMEEGMFPSQMSLEEGDRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEECVEEVRLRASISRPVSHQRMG
TPIAKNDSGFSLGQRVRHSSFGEGTIVNLEGSGEHSRLQVAFQRQGIKWLVAAYAKLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgacctgctcgacagcctgaatgacaaacagcgcgatgccgttgccgcg
ccgcgtagcaacctgttagtgctggcgggcgcaggcagtggcaaaactcgcgtactggtc
caccgcatcgcctggctgctggcggtggagaactgctctccctcgtccattatggcggtg
acctttaccaacaaggccgcggctgaaatgcgccatcgcatcggtcagctggttggcacc
agtcagggtggcatgtggattggcactttccacgggctggctcatcgcctgctgcgtgcg
caccatcttgatgctggtctgccgcaggatttccagattcttgatacggaagaccagctg
cgcttgttaaagcgcctgataaaagcgatgaaccttgatgagaaacagtggccagcgcgt
caggccatgtggtacatcggcggtaaaaaagatgaaggcctgcggccaaaacatatcgaa
agctacggcaatccggtcgagcagatctggctgcgaatttatcaggcgtaccaggaagcc
tgtgaccgcgccgggctggtggattttgccgagctgctgctgcgcgcccatgagctgtgg
ctgaataaaccacatattctcaatcattaccgcgagcgcttcagcaatattctggtggac
gaattccaggacaccaacaacatccagtacgcatggattcggctgctggctggcgaaacg
ggcaacgtgattattgttggcgatgatgaccagtcgatttatggctggcgcggtgcgcag
gtggaaaacattcagcgctttctcaatgatttcaacggcgcgcagaccatccgtcttgag
cagaactaccgctcgaccaataacattcttaaggccgctaacgccttgatctcgaataac
aacggacgactgggcaaagagctgtggaccgatggcagcgacggcgagccgattgctctc
tattgcgcgtttaacgagctggatgaagcgcgtttcgtggttaaccgcatcaaagtgtgg
atggaaaacggcggcgcgctgaatgattgcgccatcctttatcgcagtaacgctcagtcg
cgtgtgctggaggaggcactgctgcaaaccagcatgccttatcgcatctacggcggaatg
cgcttctttgaacgccaggaaatcaaagacgcgttggcttacttgcggctgattgctaac
cgcaatgacgatgccgccttcgagcgggtggttaatacgcccgtgcggggtattggtgat
cgcactctggacgtggtgcgccagacggcgcgtgagcgtaagttaacgctatggcaaacc
gcgcgcgccttgctacaggagaaagtgctggctggccgtgccgccgcggcactgcaacgt
ttcactgaactggtggattctcttgcatatgaaaccagcgagctgccgctgcacgtgcaa
accgatcgggtgatcaaggattccggcctgtggctgatgtatgagcaggagaaaggcgaa
aaaggtcaggcccgcatcgaaaaccttgaggagctggttaacgccacgcggcagtatagc
tatcaggacgaagacgaagatttaatgccgctgcaggcgtttctgtcccatgccgcgctg
gaggcgggggaaggtcaggcggataaatggcaggacgcggtgcagctgatgacgctgcac
tcggcgaaaggccttgaatttatgcaggtgtttatcgttggtatggaagagggcatgttc
ccaagccagatgtcgctggaagaaggcgacaggctggaagaagagcgccgtctcgcctat
gtcggcgtcactcgtgcgatgcaaaaactgaccctgacctatgctgaaacccgccgcctg
tacggtaaagaggtgtatcaccgtccgtcgcgctttgttggggaactgccggaagaatgc
gtggaagaagtacgcctgcgggccagcatcagccgcccggtcagccatcagcgcatgggt
acccccattgcgaagaacgacagcggcttttcgctgggccagcgtgtgcgccattcctca
tttggtgagggtaccattgttaatctggaaggcagcggcgaacacagccgtttgcaggtg
gcttttcagaggcaggggattaaatggctggtggctgcctatgcgaagctggaagcggtc
tga
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