Edwardsiella piscicida EIB202: ETAE_0407
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Entry
ETAE_0407 CDS
T01121
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etr03016
]
ETAE_0407 (truB)
Enzymes [BR:
etr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ETAE_0407 (truB)
Transfer RNA biogenesis [BR:
etr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ETAE_0407 (truB)
Prokaryotic type
ETAE_0407 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACY83254
UniProt:
A0AAU8PFG1
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All DBs
Position
451484..452446
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AA seq
320 aa
AA seq
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MSRPRRRGRDINGVLLLDKGQGMSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYRVIARLGQRTDTSDADGQVVCERPLSFSEAELAQALEGFRGPGR
QVPSMYSALKYQGRPLYEYARQGIDVPRESREITVFELRFIRWEGDELELEIHCSKGTYI
RTIIDDLGEVLGCGAHVIYLRRLQVSGYPSERMVTLEQLQALLAQAQQQERDPRLLLDPL
LLPMDTAAAHLPEVNLSEIVAGYVQLGQPVQTPDLPQSGMVRISVGAAHRFIGVGEVDDQ
GRLAPRRMVVESRLSEDDPT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaccccgtcgccgcggccgcgatattaacggcgtcctgctgctggataaaggg
caggggatgtcctctaacgatgtgctgcagaaggtaaagcgcatctataacgccaacaag
gcggggcataccggtgcgctggatccgctggcgaccgggatgctgccgatttgcctgggc
gaagcgaccaagttttctcagtttttgctggatgccgacaagcgctatcgtgtcatcgcc
cgcctggggcagcgtaccgatacctctgacgccgatggtcaggtggtgtgtgagcgaccg
ctgagctttagcgaggccgagctggcgcaggcgctggaagggttccgcggccctggccgc
caggtgccctccatgtactcggcgctcaagtaccaggggcgcccgctgtacgaatatgcc
cgccaggggatcgacgtgccgcgcgaatcgcgtgagatcacggtgtttgagctgcgcttt
atccgctgggaaggggatgagctggagctggagatccactgctccaagggcacctatatt
cgcactatcatcgacgatctgggcgaagtgctcggctgcggcgcgcacgttatctatctg
cggcgtctgcaggtttccggctatccgagcgagcggatggttacgctggagcagctgcag
gcgctgttggcgcaggcgcagcagcaagagcgcgatcctcgcctgctgctcgatccgctg
ctgctgccgatggatacggccgccgcgcacctgccggaggtgaatctgtcggagatcgtc
gctggctatgtacagctggggcagccggtacagacgccggacctgccgcaaagcggaatg
gtgcgcatcagcgtcggggctgcgcaccgctttatcggcgtcggcgaagtggacgatcag
gggcgcctggcgccgcgtcgtatggtggtggagtcgcgcctctccgaggacgatccgacc
tga
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