KEGG   Edwardsiella piscicida EIB202: ETAE_0476
Entry
ETAE_0476         CDS       T01121                                 
Symbol
holD
Name
(GenBank) DNA polymerase III, psi subunit
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
etr  Edwardsiella piscicida EIB202
Pathway
etr03030  DNA replication
etr03430  Mismatch repair
etr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:etr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ETAE_0476 (holD)
   03430 Mismatch repair
    ETAE_0476 (holD)
   03440 Homologous recombination
    ETAE_0476 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:etr03032]
    ETAE_0476 (holD)
   03400 DNA repair and recombination proteins [BR:etr03400]
    ETAE_0476 (holD)
Enzymes [BR:etr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ETAE_0476 (holD)
DNA replication proteins [BR:etr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ETAE_0476 (holD)
DNA repair and recombination proteins [BR:etr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ETAE_0476 (holD)
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: ACY83323
UniProt: A0AAU8P171
LinkDB
Position
524113..524523
AA seq 136 aa
MTSRRDQLLQQLGITQWVLRRPALLRGEVAITLSAQTRLLIVSEAPLSPDDLLLCDILRA
LSLTAEQAVILTPEQYEMLSDRQRYLCWWLGESASSEACLRSPALGALYHNPGAKRALWQ
QICHEQHHFFPDPGGH
NT seq 411 nt   +upstreamnt  +downstreamnt
atgacttcgcgacgcgatcaacttttacagcagctggggataacccaatgggtcctgcgt
cgcccggcgcttctgcgcggcgaggtcgccattacgctgtcggcgcagacacggctgctt
atcgtgtctgaggctcccctgtcgccggatgatctgttactgtgcgatattctacgcgcg
ctgtcgctgacggcggagcaggcggtgatcctgacgccggagcagtatgagatgctcagc
gatcgccagcgttacctgtgttggtggctgggggagtccgcctcctctgaggcttgcctc
cgctctccggcgctcggtgcgctttaccataaccccggcgccaagcgcgccctgtggcag
caaatttgtcatgagcaacatcatttcttccctgaccccggcggacactga

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