Edwardsiella piscicida EIB202: ETAE_0693
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Entry
ETAE_0693 CDS
T01121
Symbol
ligT
Name
(GenBank) 2-5 RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etr03016
]
ETAE_0693 (ligT)
Enzymes [BR:
etr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ETAE_0693 (ligT)
Transfer RNA biogenesis [BR:
etr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ETAE_0693 (ligT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACY83540
UniProt:
A0AAU8PHA4
LinkDB
All DBs
Position
complement(763715..764245)
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AA seq
176 aa
AA seq
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MQQRLFFAIPLPPPLQQTLIQWRAEHFSSQAGRPIAAANLHLTLAFLGDVGSAQQQRLQT
LAGRIRQAPFSLTLDDAGQWPRPGVVWLGMRRAPRGLIQLAELLRSQAARSGCYQSPLPF
HPHITLLRHAYQAVAIPAATFRWSFDVTHFSLFSSQQSQGRTRYQPLASWPLRRDD
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacgccttttttttgccattccgctaccgccgccactgcagcaaacgctgatc
cagtggcgagccgagcacttttcttcccaggcaggacgaccgatcgccgccgccaacctg
catctgacgctggcttttcttggcgacgtcggcagcgcacagcagcagcgtctgcagacg
ctggccgggcgtatccgtcaggcgccctttagcctgacgctggatgacgccggtcagtgg
ccgcgccccggcgtggtctggctgggtatgcgccgggcgccgcgcggactgatccagctg
gcggagctgctccgctcgcaggcggcgcgcagcggctgctaccagagcccgctccccttt
catccgcatatcacgctgctgcgtcacgcctatcaggcggtcgcgatccccgcggcgacc
tttcgctggtcgtttgacgtaacgcacttttccctgttcagctcgcagcagtcccaggga
cgcacccgctatcaaccgctggccagctggcccctgcggcgcgatgactaa
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