Edwardsiella piscicida EIB202: ETAE_0995
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Entry
ETAE_0995 CDS
T01121
Symbol
hupB
Name
(GenBank) transcriptional regulator HU subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etr03032
]
ETAE_0995 (hupB)
03036 Chromosome and associated proteins [BR:
etr03036
]
ETAE_0995 (hupB)
03400 DNA repair and recombination proteins [BR:
etr03400
]
ETAE_0995 (hupB)
DNA replication proteins [BR:
etr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ETAE_0995 (hupB)
Chromosome and associated proteins [BR:
etr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ETAE_0995 (hupB)
DNA repair and recombination proteins [BR:
etr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ETAE_0995 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ACY83840
UniProt:
A0AAU8P5Q8
LinkDB
All DBs
Position
1087505..1087777
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAEGADISKAAAGRALDAFIASVTESLQEGDAVALVGFGTFDVRERAARTG
RNPQTGQEIDIPAAKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatcacaactgatcgacaagattgctgagggtgcagatatttccaaagcggca
gccggtcgcgcgctggatgcattcattgcatccgtgaccgaaagcctgcaggaaggtgac
gccgtcgcactggtcggttttggtacttttgacgtccgcgaacgtgctgcccgcactggc
cgtaatccgcagacgggccaggaaattgatattcctgccgcgaaagttccgggtttccgc
gcgggcaaagcgctgaaagacgccgttaactaa
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