Edwardsiella piscicida EIB202: ETAE_1079
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Entry
ETAE_1079 CDS
T01121
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etr03400
]
ETAE_1079 (sbcD)
DNA repair and recombination proteins [BR:
etr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAE_1079 (sbcD)
Archaeal homologous recombinant proteins
ETAE_1079 (sbcD)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACY83924
UniProt:
A0AAU8P265
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Position
complement(1176830..1178062)
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AA seq
410 aa
AA seq
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MRLIHTSDWHLGQHFYGKSRADEHRAFLDWLLLQAEQQQADAIIVAGDLFDTGTPPSYAR
ELYNRFVVALQGRGCQLIVLAGNHDSVATLNESRELLACLHTQVIAGAHADDAPLLLRRR
DGSPGAILCAVPFLRPRDLLQSRAGQSAAEKQLALQQAISDHYHALYQRALALQASLAQP
LPIVATGHLTTVGASGSESVRDIYIGTLDALPASAFPPADYIALGHIHRPQRVGHAEHIR
YSGSPIPLSFDELGSSKSVCLVTLAYGSAPQITQLPIPQTQPMRLLKGSLTEIGAAMEAL
RPLATDKPVWLDIEIDSDGWLSESERTLQQQAETLPVEILLLRRSREQRQRALTMQAGET
LSELTPDDVFSRRLALEQESDPQQQARAQRLFQQVLQEITLDPDTEETQA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgatccatacctccgactggcaccttggccagcatttctacggtaaaagccgc
gccgatgaacaccgtgcgtttctcgactggctgctgctgcaggccgagcagcagcaggcc
gacgccatcatcgtggccggcgatctgttcgataccggaacgccgcccagctatgcccgt
gaactgtacaaccgctttgtggtggcgctacagggacgcggctgtcagctgatcgtcctg
gcgggtaaccacgactcggtggcgaccctcaacgaatcccgcgagctactggcctgcctg
catacccaggtgatcgcgggcgcccacgccgacgatgcgccgctgctgctgcggcgacgc
gacggcagccccggcgccatcctgtgcgccgttccctttctgcgaccgcgcgacctgctg
caaagccgcgccggccagtccgccgcggagaagcagctggcgctgcagcaggccatcagc
gatcactaccacgccctgtatcagcgtgcgctggcgctgcaggcctcgctagcgcagccg
ctgccgatcgtcgccaccggccacctgaccaccgtcggcgccagcggctccgaatcggtg
cgcgatatctatatcggcacgctggatgccctgccggccagcgcctttcccccggcagac
tatatcgccctggggcacattcaccgcccgcagcgggtcggtcacgcggagcatattcgc
tacagcggctccccgatccccctgagctttgacgagttgggcagcagcaaaagcgtctgc
ctggtgaccttagcgtacggcagcgcgccgcagataacccagctgcccatcccccagacc
cagccgatgcgcctgctcaagggctcgctgacggagattggcgcagccatggaggccctg
cgcccactggcgacggacaagccggtctggctggacatcgagatcgacagcgacggctgg
ctcagcgaaagcgaacgcacgctgcagcagcaggcggagacgctgccggtggagatcctg
ctgctgcggcgcagccgtgagcagcgtcagcgcgccctgaccatgcaggccggcgagacc
ctgagcgagctgacccccgacgacgtatttagccgacgcctggcgctggagcaggagagc
gatcctcagcagcaagcgcgggcgcagcggctgttccagcaggtgctgcaggagataacg
ctagaccccgataccgaggagacgcaggcatga
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