Edwardsiella piscicida EIB202: ETAE_1460
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Entry
ETAE_1460 CDS
T01121
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etr03016
]
ETAE_1460 (rnd)
Enzymes [BR:
etr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ETAE_1460 (rnd)
Transfer RNA biogenesis [BR:
etr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETAE_1460 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
ACY84301
UniProt:
A0AAU8P2W9
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All DBs
Position
1573611..1574726
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AA seq
371 aa
AA seq
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MLKYQLITSSSALKEVCERASACPYIALDTEFVRTRTYYPQLGLVQLYDGETLSLIDPLP
ISDWQPFVDLLRNPQVVKLLHAGSEDLEVFLHDFQTLPQPLIDTQILAAFTGRPLSSGFA
AMVSAYLQVDLDKSESRTDWLARPLSERQCDYAAADVYYLLPMAHKLLAEVEACGWLPAA
LDECQALCRRRAETVDPTLAYRDMTNAWQLRPRQLACLQLLGEWRLNQARTRDMAVNFVV
REESLWLVARYMPGSMAELSEIGVSGPEIRYHGKALLEIVERSAALEEAQLPPAVERLID
HPGYKQAFKHIKTLVQQVAEQKGLTAELLASRRQINQLLSVHWQLKTEQPELLSGWRGQL
LADGLNGVLTK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagtatcagttaattacctccagcagtgcgctgaaagaggtctgtgaacgcgcc
agcgcctgcccctatatcgcgctggatacggagtttgtccgcacccgtacctactatccc
cagctggggctggtgcagctgtatgacggtgagacgctgtcactcatcgatccgctgccg
atctccgactggcagccgtttgtcgatctgctgcgtaacccgcaggtcgtcaaactgctg
cacgccggcagcgaagatctggaggtcttcctgcatgacttccagactctgcctcagccg
ctgatcgacacccagatcctggctgcctttaccggtcgcccgctctccagcggctttgcc
gccatggtcagcgcttatctgcaggtggacctggataagagcgagtcgcgcaccgactgg
ctggcccgtccgctaagcgagcgtcagtgcgactatgccgcggcagacgtctattacctg
ctgccgatggcgcacaagctgctggccgaggttgaggcctgcggctggctgccggcggcg
ctcgacgagtgccaggctctgtgccgccgtcgcgccgaaacggtggatccgacgctggcc
taccgggatatgaccaatgcctggcagctgcgtccgcgtcagctggcctgcctgcagctg
ctgggcgagtggcgcctgaatcaggcccgcacccgcgatatggcggtgaacttcgtggtg
cgtgaggagagcctgtggctggtggcacgctacatgccgggctcgatggccgagctgagc
gaaatcggcgtcagcgggccggagatccgctatcacggtaaggcgctgctggagatcgtc
gagcgcagcgccgcgctggaagaggcgcagctgccgcccgccgtcgagcgtctgatcgac
cacccgggctataagcaggcgtttaagcacattaagacgctggtgcagcaggtggcagag
cagaaggggctgacggcggagctgctggcgtctcggcgccagatcaatcagctgctgagc
gtacactggcagctgaagacggagcagccggagctgctgagcggctggcgcggtcagctg
ctggccgatgggctgaatggcgtactgacaaaatag
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