Edwardsiella piscicida EIB202: ETAE_1552
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Entry
ETAE_1552 CDS
T01121
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etr03032
]
ETAE_1552 (topA)
03400 DNA repair and recombination proteins [BR:
etr03400
]
ETAE_1552 (topA)
Enzymes [BR:
etr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ETAE_1552 (topA)
DNA replication proteins [BR:
etr03032
]
Prokaryotic type
DNA Topoisomerases
ETAE_1552 (topA)
DNA repair and recombination proteins [BR:
etr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ETAE_1552 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_LysW
Toprim_4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ACY84393
UniProt:
A0AAU8P339
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All DBs
Position
1657359..1659959
Genome browser
AA seq
866 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKGAASADDKAKTKAK
KNERDALVNRMGVDPYHGWQAHYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDSRYSRVVFNEITKNAIQQAFSQPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKVARGLSAGRVQSVAVRLIVEREREIKAFVPEEYWELRADLAVGAEVSFQAQVTH
CNDKPFKPVNAAQSQAAVAALEHARFAVREREDKPTSSKPSAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDALNMVRAYIGDNFGAEYLPADANVYASKDN
SQEAHEAIRPSDVNVLADDLKGMEADALKLYQLIWRQFVACQMTAAKYDASTITVQAADY
TLKARGRTLRFDGWTRVLPQLRKGDEDRALPAVESGRALDLLQLQPSQHFTKPPARFSEA
SLVRELEKRGIGRPSTYAAIISTIQDRGYVRTDNRRFYAEKMGEIVTDRLEENFRELMSY
DFTAHMEDGLDRVASAQADWKVMLDGFFSDFSQQLEVAEKPPEEGGMRPNPMVLTSIACP
TCERQMGIRTASTGVFLGCSGYALPPKERCKTTINLVPEAEVLNVLEGDDAETNALRAKR
RCPKCGTAMDSYLIDNHRKLHVCGNNPACDGYEVEEGEFRIKGYDGPIVECDKCGAEMHL
KMGRFGKYMGCTNEACKNTRKILRNGEVAPPKEDPVPLPELACEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLAEAPQQDEQGNATLVRFSRKTKQQYV
SSEKEGKATGWTAFFIDGKWVVSEKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatagttgagtccccggcaaaggccaaaaccataaataagtat
ctcggcaatgactacgtggtgaagtccagcgtcggtcatatccgcgatctgccgaccagt
ggctcagccagtaagaagggcgcggcctcggccgacgataaggcgaagacgaaggccaaa
aagaatgagcgcgatgcgttggtcaatcgtatgggggtcgatccctatcacggctggcag
gcgcattacgaagttctgccgggcaaagagaaggtggtgtctgagctaaagtccctggcc
gagaaagccgatcacatttatctggcaaccgaccttgaccgcgaaggagaggccatcgca
tggcatctgcgcgaggtgattggcggtgatgacagccgctatagtcgcgtggtgtttaac
gaaattaccaaaaacgccattcagcaggcattcagtcagcccggtgagctgaatatcgat
cgggtcaacgcccagcaggcgcgccgtttcatggatcgcgtggtgggctatatggtgtcg
ccgctgctgtggaaaaaggtcgcccgtggtctctcggctggccgagtccagtccgtcgcc
gtgcggttgatcgttgagcgggagcgtgaaatcaaggccttcgtgccggaagagtattgg
gagctacgggccgatctcgccgttggcgcagaggtcagcttccaggcccaggtgacccac
tgcaacgataaaccgtttaagccggttaacgccgcgcaaagccaggcggccgttgccgcg
ctggagcacgcccgcttcgcggtgcgtgagcgcgaggataagccgaccagcagcaagccg
tctgcgccctttatcacctcgacactgcagcaggcggccagtactcgccttggctttggg
gtgaagaaaaccatgatgatggcccagcgtctgtacgaggcagggtacattacctatatg
cgtaccgactcgaccaacctgagtcaggacgctctgaatatggtgcgggcctatatcggc
gataattttggtgcggagtacctgccggcggacgccaacgtctacgccagcaaggacaat
tcccaagaggcccacgaggcgattcgcccgtcagacgtcaacgtgctggccgacgatctc
aaagggatggaggccgatgcgctgaagctgtatcagctgatttggcgccagttcgtcgcc
tgccagatgacggcggccaagtacgatgctagcaccattaccgtgcaggccgcggattat
actctgaaggcgcgcgggcgcaccctgcgctttgacggttggactcgcgtgctgcctcag
ctgcgtaagggcgatgaagatcgcgctctgccggcggtggagagcgggcgggcgctggat
ctgctgcagctgcagccaagccagcactttaccaagcccccggcccgattcagcgaagcc
tcgctggtgcgcgagctggagaagcgcggcatcggccgtccatcgacctatgcggcgatt
atctcgacgatccaggatcgcggctatgtgcgcaccgataaccgtcgtttctacgcggag
aagatgggggagatcgttaccgatcgcctggaagagaacttccgcgagctgatgagctac
gactttaccgcgcacatggaagatggcctggaccgcgtcgctagcgctcaggctgactgg
aaagtgatgctggacggctttttcagcgacttcagccaacagctggaggtcgcagagaag
ccgccggaagaagggggaatgcgccccaacccgatggtactgaccagcatcgcctgtccg
acctgtgagcggcagatggggatccgtaccgccagcaccggggttttcctggggtgctcg
ggctatgcgctgccgcccaaagagcgctgtaaaaccaccatcaatctggtgccggaggcc
gaggtgcttaacgtgctggagggcgatgatgcggaaaccaacgccctgcgcgcgaagcgt
cgctgcccgaaatgcggtacggcgatggacagctacctgatcgataaccaccgtaagctg
cacgtgtgcggtaataaccccgcctgcgatggctatgaggtagaagagggcgagtttcgt
atcaaggggtatgacggcccgatcgtggagtgcgataagtgcggcgccgaaatgcatctg
aagatggggcgctttggcaagtatatggggtgcaccaacgaagcctgtaaaaacacccgt
aagatcctgcgtaacggtgaggtcgcgccgccgaaagaggacccggtaccgctgccggag
ctggcgtgtgagaagtcagacgcctatttcgtgctgcgtgacggtgccgcgggggtgttc
ctggccgccaacaccttccctaaatcgcgtgaaacccgcgccccgctggtggaagagctg
tatcgcttccgcgatcgcctgccggaaaaactgcgctatctggcagaggcaccgcagcag
gatgagcagggcaatgccacgctggtgcgctttagccggaaaaccaagcagcagtatgtt
tccagcgagaaggagggtaaggcgacgggctggaccgcgttctttatcgatggaaagtgg
gtcgtatcagagaaaaagtaa
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