Edwardsiella piscicida EIB202: ETAE_1767
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Entry
ETAE_1767 CDS
T01121
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etr03019
]
ETAE_1767 (hrpA)
Enzymes [BR:
etr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ETAE_1767 (hrpA)
Messenger RNA biogenesis [BR:
etr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ETAE_1767 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
NACHT
T2SSE
nSTAND3
AAA_23
PhoH
AAA_30
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACY84604
UniProt:
A0AAU8P3L2
LinkDB
All DBs
Position
complement(1875611..1879495)
Genome browser
AA seq
1294 aa
AA seq
DB search
MKSPLGALADQLDDVMLRDRQRLMRRLQGANKITQPDTLQATASTLAEEIARARQVTANR
RAACPTISYPPGLPVSQKSEALLAAIRDNQVVIVAGETGSGKTTQLPKMCLALGRGVRGM
IGHSQPRRLAARSVAERIAHELDTPLGSCVGYKVRFSDRVGDNTLVKLMTDGILLAEIQQ
DRLLMQYDTLIIDEAHERSLNIDFILGYLRQLLPKRPDLKVIITSATIDPQRFSRHFNNA
PIVEVSGRTYPVDVRYRPIADGEGDRDQTQAIIDAVDELRHEAPGDILIFMSGEREIRDT
ADALNRLELPHTEVLPLYARLSAAEQNRVFHAHSGRRIVLATNVAETSLTVPGIKYVIDP
GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYDEQDFLSRPAFTDP
EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAVTVNARGHQQLT
ALGRQLAQLPIDPRLARMVIEGERNGALREVMVIAAGLSIQDPRERPADRPQAADEKHRR
FSDKESDFLALVNLWNYLREQQQALSANQLRRLCKSEFLNYLRVREWQDIYTQLRQSVKS
LGFHINSAPADYRALHCALLSGLLSHIGQKDVEKQEFTGARNARFAIFPGSSLFKKPPKW
AMVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSDPHWEKSQGAVMASEKVTLYGL
PIVNERRVNYGRIDPLLCRELFIRHALVQGEWQTKHAFMRANQRLRSEVEELEHKSRRRD
ILVDDETLFAFYDRRIGQEVVSVRHFDSWWKKAGAAQPELLNFEKSMLIKEGAARISAQD
YPNAWQQGNFRLRLSYQFEPGADADGVTVHIPLAILNQIEDRDFDWQIPGIRRERVMALI
KSLPKPLRRNFVPAPNYADAFLARATPFELPLLESMERELRRMTGVTVSRDDWQLDQLPD
HLSVTFRVLDDRNRPLAEGKSLEALKQRLKDRVQQTLSAVADDGLEQAGLHLWSFGQLPQ
CYEQKRGGYAIKAYPALVDEKESVAIRLFETEQEQQQAMRRGLRRLLLLNIPSPVKYLHE
KLPNKAKLGLYFNPYGKVLELIDDCIACGVDTLVARHGGAVWETAAFEALHERVRGELNE
TVVAIAAQVERILTCANGINKRLKGRVDMTMALALSDIKAQLGGLIYRGFVTATGADRLA
DVERYLHAIERRLEKLGIDPHRDRAQMLRVEQVQQAWQQWLNRLPPVRRQAPEVQAIRWM
IEELRVSYFAQQLGTPYPVSDKRILQAMEAAEQP
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatccccgcttggtgcgctggccgaccagcttgatgatgtcatgctgcgcgatcgc
cagcgtttgatgcgccgtctccagggcgccaataaaatcacccaacccgataccctgcag
gcgaccgcctcgacgctggcggaggagatagcccgggcgcgtcaggtgacggccaaccgg
cgcgccgcctgtccgacgattagctatccgccggggctgccggtcagtcagaagagcgag
gcgctgctggcggcgatccgcgataatcaggtggtgattgtcgccggggagaccggctcc
ggtaaaacgacccagctgcccaaaatgtgcctggcgctggggcgcggagtgcgcggaatg
atcggtcacagtcagccgcgccgcttggcggcccgttcggtggcagagcgtatcgcccat
gagctggataccccgctgggtagctgcgtgggctataaggtgcgctttagcgatcgggtc
ggcgacaatacgctggtcaagctgatgaccgacgggattttgctggcggagatccagcag
gaccgcctgctgatgcagtatgacacgctgattatcgatgaggcccacgaacgcagcctg
aacatcgactttatcctgggctatctgcgtcagctgctgcccaagcgtcccgatctcaag
gtgatcatcacctcggcgaccattgacccgcagcgtttctcccgccacttcaataatgcg
ccgatcgtcgaggtgtccggacggacctatccggttgacgttcgctaccggcccatcgcc
gatggcgaaggcgatcgcgatcagacccaggcgattatcgatgcggtggatgagctgcgc
catgaggcgccgggcgatattctgatctttatgagcggcgagcgagagatccgcgatacc
gccgatgcgctgaaccgccttgagctgccccataccgaggtgctgccgctgtatgctcgc
ctgtccgcggccgagcagaaccgggtctttcacgcccatagcggacggcgcattgtgctg
gcgaccaacgtggcggagacctcgctgacggtgccggggatcaaatatgttatcgatccc
ggtacggcgcgcatcagtcgctacagctatcggaccaaggttcagcggctgccgattgag
ccgatatcccaagcctcggccaatcagcgtaaagggcgctgcggccgcgtctccgatggg
atctgtatccggctgtacgatgagcaggacttcctgtcgcgtcccgcctttaccgatccg
gagatcctgcgcaccaatctcgcgtcggtgatcctgcagatgaccgcgctggggctgggc
gacattgctgccttcccctttgtcgaggcgccggataagcgcaatattcaggatggggtg
cgtctgctggaggagctgggcgcggtcacggtcaatgcgcgtggacaccagcaactgacc
gcgctgggacgtcagctggcgcagctgcccatcgatccgcgtctggcgcgcatggtgatc
gaaggggagcgcaacggtgccctgcgtgaggtgatggtgatcgccgccgggctgtcgatt
caggacccgcgcgaacggcccgccgaccgtccgcaggcggcggatgagaagcaccgtcgc
ttcagcgataaagagagtgactttctggcgctggtcaatctgtggaactatctgcgcgaa
cagcagcaggcgctctccgctaaccagctgcgtcggctgtgtaaaagcgagtttctcaac
tatctgcgggtgcgcgagtggcaggatatctatacccagctgcgtcagtcggtgaaatcg
ctggggttccatattaacagcgcccccgccgattaccgggcgctgcactgcgcgctgctg
agcggcctgctctcccatatcggacagaaagatgtcgaaaagcaggaatttacaggcgcg
cgcaacgcccgtttcgccatttttcccggttcgtcgctgtttaagaagccgcccaagtgg
gcgatggtggcggagctggtggagacctctcgcctgtgggggcgcgtcgccgcacggatc
gacccggagtggatcgaacccttggcacagcacctgattaagcgcagctatagcgatccg
cactgggagaaaagccagggcgcggtgatggccagcgagaaggtcacgctgtatggtctg
ccgatcgtcaacgagcggcgagtgaactatggacgcatcgatccgctgctgtgccgagag
ctgtttattcgccatgccctggttcagggggagtggcagacaaagcacgcctttatgcgc
gccaatcaacgtctgcgcagcgaggtcgaagagctggagcacaagtcgcgtcgccgcgat
attctggtggatgacgagacgctgtttgccttttatgaccgacggatcggtcaagaggta
gtgtcggtgcgtcacttcgatagctggtggaagaaagcgggggccgcgcagcccgagctg
ctcaactttgagaagtcgatgctgatcaaagagggggccgcccgcattagcgcgcaggat
taccccaatgcctggcagcagggcaactttcgcctgcgtctttcctaccagttcgagccg
ggcgcggatgccgacggcgtgacggtgcatattccgctggcgatcctgaatcagatcgag
gatcgtgattttgattggcagatccccggtattcgccgtgagcgcgtgatggcgctgatc
aagtcgctgccgaagccgctgcggcgtaactttgtgccggcccccaactatgccgatgcc
ttcctggcccgtgcgacgccctttgagctgccgctgctggagtcgatggagcgcgaactg
cgccgcatgacgggtgtgacggtgtcacgtgatgactggcagctggatcagctgcccgat
cacctgagcgtcacgtttcgggtgctggacgatcgcaaccggccgctggccgagggtaag
tcgctggaagcgctgaagcagcgtttgaaggatcgtgtacagcaaaccctgtcggcggtg
gcggacgatggccttgaacaagcggggctgcatctgtggagctttggtcagctgccgcag
tgctatgagcaaaagcgcggcggctatgccatcaaggcctatccggcgctggtggatgag
aaggagagcgtggcgatccggctctttgagaccgaacaggagcagcagcaggcgatgcgc
cgcggtctgcgccgactgctgctgctgaatattccgtctccggtgaagtatctgcatgaa
aagctgccgaacaaggccaagctggggctctactttaacccctatggcaaggtgctggag
ctgatcgacgactgcatcgcctgcggcgtggatacgctggtggcgcgccacggcggcgcc
gtctgggagaccgcggcgtttgaggcgctgcatgagcgggtgcgcggcgagctgaatgag
acggtggttgcgattgccgcacaggtcgagcgcattctgacctgtgccaacgggatcaat
aagcgcctgaaagggcgggttgacatgacgatggcgctggccctctccgatattaaggcg
cagctgggcgggcttatctaccggggctttgtcacggcgaccggcgcggatcgcctggcg
gacgtggagcgctatctgcacgccatcgagcgtcgcctggagaagctgggtatcgacccg
caccgcgatcgggcccagatgctgcgcgttgaacaggtacagcaggcctggcagcagtgg
cttaaccgtctgccgccggtgcggcgtcaggcgccggaggtgcaggctatccgctggatg
atcgaggagctgcgcgtcagctattttgctcagcagctgggcacaccctatccggtgtca
gacaagcgtatcctgcaggcgatggaggcggcggagcagccatag
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