Edwardsiella piscicida EIB202: ETAE_1878
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Entry
ETAE_1878 CDS
T01121
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etr03016
]
ETAE_1878
Enzymes [BR:
etr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ETAE_1878
Transfer RNA biogenesis [BR:
etr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETAE_1878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACY84715
UniProt:
D0Z8E6
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All DBs
Position
1985043..1986914
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AA seq
623 aa
AA seq
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MVKGTDKGFGFLEVDAQKSYFIPPPQMKKVMHGDRVRAAVQVDKEREIAEPEELLEPFLT
RFVGRIQKKENDERLSIIPDHSLLKDAIGCRPARGLDRAFRQGDWVLAEMRRHPLKGDRS
FFAEITAFITDGSDHFAPWWVTLTRHDLARSAPQWQAGTLLEEGLAREDLCALPFVTIDS
ASTEDMDDALHVRENADGSLCLTIAIADPTAYVSADSPLDAEARHRAFTTYLPGFNIPML
PRDLSDDLCSLREGQRRPVLACEVTLDADGSLRDDIRFFSGWIESKAKLVYDRVSDWLEG
RGDWQPPSDDIAAQIRLLHRVANARTQWRQQHALVFRDRPDYRFVLDDHGDVTDIVAEPR
RVANRIVEECMITANVCAALVLRERLGFGIYNVHTGFDPALVEQAVSLLNANDVAANAEA
LLTLDGFCTLRRHLDSLPSTFLDSRIRRFQTFAEISTEPGPHFGLGLEAYATWTSPIRKY
GDMVNHRLLKALIAGAPATRPDPAMTLQLAERRRQNRMAERDVGDWLYARFLKDKVNAPT
PFNAEIIDISRGGMRVRLLENGAVAFIPASFIHAVRDEMVCSQENGTLQVKGSVVYRQGD
TVPVTLSEVRLDTRSLIARPFSA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaagggaaccgacaaaggctttggctttttagaggtcgacgcgcagaagagctat
ttcattccgccgccgcagatgaagaaagtgatgcacggcgaccgcgtccgtgccgccgtt
caggttgataaagagcgcgaaatcgccgagccggaagagctgctggagcctttcctgacc
cgttttgtcgggcgtatccagaaaaaagagaacgacgaacgtctgtccatcatcccggat
cactcgctgttgaaagacgccatcggctgtcgtccggcgcgcgggctggatcgcgccttc
cggcagggagactgggtgctggccgaaatgcgccgccatccgctgaagggcgaccgcagc
ttctttgccgagatcaccgccttcattaccgacggcagcgaccactttgccccctggtgg
gtcaccctgacccgccacgatctggcgcgcagcgcgccgcagtggcaggcgggaaccctg
ctggaagaggggctggcgcgtgaagatctgtgcgcgctgccgtttgtcaccatcgacagc
gccagcaccgaagatatggatgatgcgctgcacgtgcgcgagaacgccgacggcagcctg
tgcctgaccatcgctatcgccgatccgacggcctacgtcagcgccgacagtccgctggac
gccgaggcgcgccatcgcgccttcaccacctatctcccgggctttaacatcccgatgctg
ccgcgcgatctctctgacgacctgtgctcgctgcgcgaagggcagcgccgtccggtgctg
gcctgcgaggtcaccctcgacgccgacggcagcctgcgcgacgacatccgcttcttcagc
ggctggatcgagtccaaggcaaagctggtctacgatcgggtctccgactggctggagggc
cgcggcgactggcagccgccgagcgacgatatcgccgcccagatccgactgctgcaccgc
gtggccaacgcccgcacccagtggcgtcaacagcatgccctggtgttccgcgatcgcccg
gactaccgctttgttctcgacgatcacggcgacgttaccgatatcgtcgcggagccgcgc
cgggtggccaaccgcatcgtagaagagtgcatgatcaccgccaacgtctgcgcggcgctg
gtgctgcgcgaacgcctcgggtttgggatctacaacgtccataccggctttgatccggcg
ctggtggagcaggccgtctcactactgaacgccaacgacgtcgccgccaacgccgaggcg
ctgctgacgctggacggcttctgcaccctgcgccgccatctcgactcgctgccgagcacc
ttcttagatagccgtatccgccgcttccagacctttgccgaaatcagcaccgagccgggg
ccgcactttggcctggggctggaggcctacgccacctggacctcaccgatccgtaagtat
ggcgatatggtcaaccaccgtctgctgaaggcgctgatcgccggagcaccagcgacgcgg
ccggacccggcgatgacgctgcagctggccgagcgccgccgtcagaaccggatggcggag
cgcgacgtcggcgactggctgtacgcccgcttcctgaaggacaaggtcaacgccccgacc
ccgttcaacgccgagatcatcgatatctcgcgcggcggcatgcgcgtccgcctgctggag
aacggcgcggtggcctttattccggcctccttcatccatgccgtgcgcgacgagatggta
tgcagccaggagaacggcacccttcaggtgaaaggcagcgtcgtctaccgccagggcgat
accgttccggtgaccctgagcgaggtgcgcctcgatacccgcagcctgatcgctcgcccc
ttcagcgcctga
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