Edwardsiella tarda EIB202: ETAE_2174
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Entry
ETAE_2174 CDS
T01121
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
etr
Edwardsiella tarda EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etr03032
]
ETAE_2174
03036 Chromosome and associated proteins [BR:
etr03036
]
ETAE_2174
03400 DNA repair and recombination proteins [BR:
etr03400
]
ETAE_2174
DNA replication proteins [BR:
etr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ETAE_2174
Chromosome and associated proteins [BR:
etr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ETAE_2174
DNA repair and recombination proteins [BR:
etr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ETAE_2174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
MDMPI_C
TetR_C_30
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ACY85009
LinkDB
All DBs
Position
complement(2286543..2286827)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLASQQPHLPAKAVEDAVKEMLEHMAATLADGERIEIRGFGSFSLHYRAPRV
GRNPKTGEKVELEGKYVPHFKPGKELRDRANIYA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaactcattgaaagacttgccagtcagcagccccatctgcctgctaag
gccgttgaggatgcggtaaaagagatgctggaacatatggcagctacgctcgccgacggt
gaacgcatcgagatccgtggttttggcagtttttcacttcactaccgtgctccccgcgtc
ggccgtaacccgaaaaccggcgaaaaagtggagctggaaggtaaatacgttccccacttt
aaaccgggtaaagagttacgcgatcgggcaaacatctacgcttga
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