Edwardsiella piscicida EIB202: ETAE_3133
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Entry
ETAE_3133 CDS
T01121
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etr03019
]
ETAE_3133 (cafA)
03009 Ribosome biogenesis [BR:
etr03009
]
ETAE_3133 (cafA)
Messenger RNA biogenesis [BR:
etr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ETAE_3133 (cafA)
Ribosome biogenesis [BR:
etr03009
]
Prokaryotic type
rRNA processing factors
ETAE_3133 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF7351
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ACY85964
UniProt:
A0AAU8PBE0
LinkDB
All DBs
Position
complement(3305182..3306651)
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AA seq
489 aa
AA seq
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MTTELLVNVTPSETRVAYIDGGILQEIHIERESKRGIVGNIYKGRVSRVLPGMQAAFVDI
GLEKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIDSEAERERLKAIVAPHCDELGGFIIRTAAEGADDE
ELAQDAAFLKRLWIKVMERKRRNKTKCMLYGELALAQRVLRDFAGASLDRIRVDSRLTYD
LLQDFTSEYMPEMTPCLELYSGKQPIFDMYDVENEIQRALERRVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLDETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMSCEDHRRRV
LHSLEQALSKDRAKTSINGFSQLGLVEMTRKRTRESIEHVLCGECPTCHGRGTVKTVETV
CYEILREIVRVHHAYDSDRFLVYASPAVGEALKSEESHALAEVELFVGKQVKVQIETLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaactgttggttaacgttaccccatcggaaacgcgcgtcgcctatatcgat
ggcggtatcctgcaggagatccatattgagcgcgagtccaagcgcggcatcgtcggcaat
atatacaaagggcgcgtgagccgggttctgcccggaatgcaggcggcctttgtagatatt
ggtctggagaaggcggcgtttctgcacgcctccgacatcatgccgcacaccgagtgcgtt
gccggtgacgagcagaagaactttcacgtgcgcgatatcgccgagctggtgcgtcaggga
caggatctgatggtgcaggtggtgaaggatccgctgggcaccaagggggcgcggctgacc
accgatattaccctgccgtcgcgctatctggtgtttatgccgggcgccagccacgtcggg
gtctcgcagcgcatcgacagcgaggcggagcgcgagcgcctgaaggcgatcgtcgccccg
cactgcgacgagctgggcggctttattatccgcacggcggcggagggggccgacgacgag
gagctggcgcaggacgccgcgtttctcaagcgcctgtggatcaaggtgatggagcgcaag
cggcgcaataagaccaagtgcatgctgtacggtgagctggcgctggcgcagcgggtgctg
cgcgactttgccggggcctcgctggatcgtatccgggtggattcgcgcctgacctacgat
ctgctgcaggacttcaccagcgaatacatgccggagatgaccccctgcctggagctgtac
agcggtaagcagccgatctttgacatgtacgacgtggagaacgagatccagcgggcgctg
gagcgccgggtggagctgaagtcgggcggctatctgatcatcgatcagaccgaggcgatg
accaccatcgacattaacaccggcgccttcgtcggccaccgcaatctggatgagaccatc
ttcaataccaacgtcgaggcgacccaggccattgcccgtcagctgcgtctgcgtaacctg
ggcggcatcatcatcatcgactttatcgacatgagctgcgaggatcaccggcgtcgggtg
ctgcactccctggagcaggccctcagcaaggatcgggcaaaaaccagcatcaatggcttt
tcgcagctaggcttggtagagatgacccgtaagcgcacccgtgagagcatcgagcacgtg
ctgtgcggcgagtgcccgacctgtcacggccgcggcacggtgaaaaccgtggagacggtg
tgctacgagatcctgcgcgagatcgtgcgggtgcaccatgcctatgacagcgatcgcttc
ctggtgtatgcctctccggcggtgggcgaggcgctgaagagcgaagagtcccacgccctg
gcggaggtcgagctgtttgtcggcaaacaggttaaagtacagattgagacgctctacagt
caggagcagttcgacgtagtgatgatgtaa
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