Edwardsiella piscicida EIB202: ETAE_p016
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Entry
ETAE_p016 CDS
T01121
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
etr
Edwardsiella piscicida EIB202
Brite
KEGG Orthology (KO) [BR:
etr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etr03032
]
ETAE_p016 (topA)
03400 DNA repair and recombination proteins [BR:
etr03400
]
ETAE_p016 (topA)
Enzymes [BR:
etr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ETAE_p016 (topA)
DNA replication proteins [BR:
etr03032
]
Prokaryotic type
DNA Topoisomerases
ETAE_p016 (topA)
DNA repair and recombination proteins [BR:
etr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ETAE_p016 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
HVO_2753_ZBP
DUF7340
Zn_ribbon_8
DNA_ligase_ZBD
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ACY86399
UniProt:
A0AAU8P8U0
LinkDB
All DBs
Position
pEIB202:complement(11547..13517)
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AA seq
656 aa
AA seq
DB search
MNLVIVESPGKVKKIREILGQGWDVQASVGHVRDLPEREMGVEAPDFKPKYVPTERGKDV
LAKLRKSVERANAVYLATDLDREGEAIAWHLKQALRLDNPQRIRFAEITPKAIKTAIASP
SGIDIKMVAAQEGRRVLDRLVGYMVSPKLGDMAGRRGLSAGRVQSPAVRIVLERERAIQA
FKPTSHFGAQLGFGDWTADWDTRPFLPEGQKYLLDKSLADRAAALRQVEVLDCEEKEESK
APPAPFITSTLQQAASNKLRMKPKATMEAAQKLYEQGLITYMRTDNPNLSDDALIEIYQV
CQAKGLPMVDQPRTWKAKGDAQEAHEAIRPTHFDVEEAGDTPEQQAIYKLIWQRALGCQL
AAARYAVRTVRLRAVDGLDGKPVDFIGKGRALVYEGWRAIYEDDTESDDDKKKDKEGANN
PVPHLEPGQQLDAETGRVLAKKTRAPSRFTEAELIKELERLGIGRPSTYAAIMQNIISRG
YVDYDKAGKYLVPTDTGALVIDALVNSRFSFIEYDFTRDMEARLDQVAEGRSSYREVVSV
VHNSLEQELGGMKVDAAPEHPCPNCGKALFRRKGGKGYFWGCSGYPDCDTTLPDAGGKPG
KRKPRQVADTPCPKCGKELVRRYKAGAGKKGYDFWSCSGYPSCDAKFDNVGGKPKI
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagttattgttgagtctccagggaaggttaagaaaatccgcgaaatcctgggg
caagggtgggacgtgcaggccagtgtcggtcatgttcgtgacctgccggaacgtgaaatg
ggcgtggaagcgcccgacttcaaacccaagtacgtgccgaccgagcgcggcaaagacgta
ctggccaaactgcgaaaatccgtcgagcgagctaacgccgtttatctggcaaccgacttg
gaccgcgaaggggaggccatcgcctggcacctcaaacaggctttgcgcctggataatccc
cagcgcatacgctttgcggaaatcactccaaaggccatcaaaacggccatagcgagcccg
tcagggatcgacattaagatggtggccgctcaggaaggccggcgcgttctggaccgtctg
gtgggctatatggtgtcgccaaagctgggcgatatggccggccggcgcggactttccgct
ggtcgtgttcaatcacccgccgtccgcatcgtcctggagcgtgaacgcgctatccaggcg
ttcaagcctacaagccactttggtgcccagctcggcttcggggattggaccgctgattgg
gatacccggccgtttctcccggaaggtcaaaagtacctgctggacaagtcactggctgat
cgagcggccgcactgcgccaggttgaagttctggactgcgaggaaaaggaagaaagcaag
gcgccgcctgctcccttcatcacgtcaacactgcaacaggccgcatccaataagctgcgg
atgaagcccaaggccaccatggaggccgcgcagaagctctatgaacagggcctgatcacc
tacatgcgcacggacaaccccaacctgtccgatgatgcactgatcgagatttaccaggtc
tgccaggccaagggcctgcctatggtggaccagccccgcacttggaaggcgaaaggcgac
gctcaggaagcgcacgaagccatccgcccaacacactttgacgttgaagaagccggcgac
acgcccgagcaacaagcgatctacaagctgatttggcaacgcgccctgggctgtcaactg
gcggcggccaggtatgcggtgcggacagttcgccttcgcgccgtcgatggcctcgatggt
aagcccgtggactttatcggcaagggccgcgccctggtctatgaagggtggcgagccatt
tacgaggacgacaccgagagcgacgacgacaagaagaaggacaaggaaggggccaacaac
ccggtgcctcacctggagccaggccaacagctcgatgccgaaactggcagagtgctggcg
aagaaaacccgcgccccttctcgtttcaccgaagccgagctgatcaaggagttggagcgc
cttggaatcgggcgaccgtccacctacgcggccatcatgcagaacatcatttccagggga
tacgtcgattacgacaaggccggcaagtacctggtgccaaccgataccggcgccctggtg
atcgacgccctggtgaacagccgttttagcttcatcgagtacgactttacccgcgacatg
gaagccaggctggaccaagtggccgaaggccgctccagctaccgcgaagtggtgagcgtg
gtccataacagcctggaacaagagctgggcggcatgaaggtcgatgctgcgccagagcat
ccttgccccaactgtggaaaggccctgtttcgccgtaaaggcggaaaaggctacttctgg
ggctgtagcggataccccgactgtgacaccacgctgccagacgccgggggcaagccaggg
aagcggaagccgcgccaagtggcagacacgccctgtcctaagtgtggcaaggagctggtc
cgacgctacaaggccggcgccggcaagaagggttacgatttttggtcatgcagtggatac
ccgtcctgtgacgccaagttcgacaacgtgggtggcaagccaaagatttga
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