Endosymbiont 'TC1' of Trimyema compressum: AZF37_00915
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Entry
AZF37_00915 CDS
T07734
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ett
Endosymbiont 'TC1' of Trimyema compressum
Pathway
ett03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZF37_00915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ett03400
]
AZF37_00915
DNA repair and recombination proteins [BR:
ett03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZF37_00915
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZF37_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AMP19931
LinkDB
All DBs
Position
135914..137881
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AA seq
655 aa
AA seq
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MNKFKLKSPFKPKGDQPKAIDELVKGMVGGDVHQTLLGVTGSGKTFTMANVIEKVNKPTL
IIAPNKTLAAQLCGEFKEFFPENAVEYFVSYYDYYQPEAYIPRSDTYIAKDSSINDEIDK
LRHSATSSLFERRDVIIVSSVSCIYGLGSPEDYKTLLLSLREGQEISRDEILSKLVDIQY
TRNDMNFIRNTFRIRGDVIEIIPANLSEQGIRVELFGDEIEKMYEFDILTGEIMGRRKHV
AIFPTSHYIVSDDKMQRAVKAIQEELQLRLAYYKSEGKLLEAQRLEERTMHDLEMMMEVG
YCSGIENYSRHLTGKKPGEMPNTLIDYFPDDFLLMVDESHVTVPQVGGMYAGDRSRKNVL
VDYGFRLPSALDNRPLSFEEFEGKINQAVYVSATPGNYEATHSTKVVEQIIRPTGLLDPV
VEVRPIKYQVDDLQSEIEKRIAINNRVLVTTLTKKMAEDLTNYFENNGLKVRYLHSEIKT
IERMEIIRDLRMGVFDVLIGINLLREGLDMPEVSLVAILDGDKEGFLRSERSLIQIIGRA
ARNAEGKVIIYADRMTDSMEKAIGETNRRRKIQAAYNKEHGIKPETIIKEVRDILEITYE
GEAEQQRKSIGKMKKREMMKLIKELEAEMTKKAKALDFEGAAELRDMILELKTSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttaagctaaaatcaccttttaaaccaaagggtgatcaacctaaagcaatt
gatgagttagtaaaaggaatggtgggtggagatgtccaccaaactttattaggtgtaaca
ggtagtggtaagacatttactatggctaatgtaattgaaaaagtaaataaaccaacttta
attatagcccctaacaaaacattagcagctcaattatgtggggaatttaaagagtttttt
ccagagaatgcagttgaatattttgttagctactatgactattatcaaccagaagcttac
attcctagatctgatacttatatagctaaagatagttctattaatgatgaaattgataaa
ttgagacactctgcaacctcttctttatttgaaagacgggatgtaattatagtttctagt
gtgtcttgtatctatggtttgggttctccagaggattataagacattgcttttatcttta
agagaaggccaagaaatctcacgagatgaaatattatctaaattagtagatattcagtat
actagaaatgatatgaattttattagaaatacatttagaattagaggggatgttattgag
attattccagctaacttatcggaacagggcatccgtgtggaattatttggagatgaaata
gaaaaaatgtatgagtttgatattttaacaggtgagattatggggagaaggaaacatgta
gctattttcccgacaagtcactatattgtttctgatgataaaatgcagagagcagttaaa
gctattcaagaagaactacagttaagactggcatattataaaagtgaaggaaaacttttg
gaagcccaaagacttgaagagcgtactatgcatgatttagaaatgatgatggaagttggt
tattgttcaggtattgagaactactcaagacacttaactggtaaaaaaccaggtgaaatg
cctaatactttaatagactattttccagatgactttttgttaatggtagatgaatctcat
gttactgtacctcaagttggtggtatgtatgcaggagaccgttcaagaaaaaatgtttta
gtcgactatggttttagattgccttctgctcttgataacagacctttatcttttgaagag
tttgaaggaaaaattaaccaagctgtttatgtttctgctactcctggaaattatgaggct
acacatagcacaaaagttgttgagcaaattattcgcccaacggggttattggatcctgta
gttgaagtaagaccgataaaatatcaagtggatgatttacaatcagaaatagaaaaaaga
attgctataaataatcgagtgttggtgactactttaacaaagaaaatggcagaagattta
accaactattttgaaaataatggtttaaaagtacgttatttacatagtgaaattaaaacc
attgaaagaatggaaattatccgtgatttaaggatgggtgtttttgatgttcttataggt
attaatctattaagggaaggtcttgatatgccagaagtatcattggtagctattcttgat
ggtgacaaagaaggatttttaagatcagagcgctcactgattcagattataggtagggct
gctagaaatgcagaaggtaaagttattatatatgcggatagaatgacggattctatggaa
aaagctattggtgaaaccaatcgaagaagaaaaattcaagcagcgtataataaagaacat
ggaataaaaccagaaactattattaaagaagttagagatattcttgagattacctatgaa
ggagaagcagaacagcagcgaaaatcaataggtaaaatgaagaaacgggaaatgatgaag
ttaattaaggagcttgaagctgaaatgactaaaaaagctaaagcattagattttgaaggc
gcagctgaattaagagatatgattttagaattaaagactagtttgtaa
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