Endosymbiont 'TC1' of Trimyema compressum: AZF37_04265
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Entry
AZF37_04265 CDS
T07734
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ett
Endosymbiont 'TC1' of Trimyema compressum
Pathway
ett03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AZF37_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ett03400
]
AZF37_04265
Enzymes [BR:
ett01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AZF37_04265
DNA repair and recombination proteins [BR:
ett03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZF37_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
T2SSE
UvrD-helicase
DEAD
AAA_28
AAA_22
TrwB_AAD_bind
PIF1
Helicase_RecD
UvrD_C
SLFN-g3_helicase
CbiA
PhoH
ResIII
AAA
AAA_12
NPHP3_N
nSTAND3
HHH_2
FTHFS
TsaE
HHH_3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AMP20484
UniProt:
A0A191HUD9
LinkDB
All DBs
Position
685692..687839
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AA seq
715 aa
AA seq
DB search
MGKLVGIVERIVYQNEENGFTVLRLREELKNNLITVTGYFAGISVGLLLEAKGRFGVFKY
GEQFEASEYKEHLPNSLEGIEKYLSSGLIKGVGAVYGKKIVNYFKEDTLEILEKYPERLL
EIEGIGEKKYEQIVSSYQGQREIKDVMIFLQSHGVSSTYALKIYKTYKNDSIRIVSENPY
ALAEDVFGIGFHIADRIASTMGFERESLKRAKAGLRYLLIQNSGKGHVYVDKKNLLTEGE
ALLGVSAYLLEDSLDCMIMDDEAIFESPEAIYLPSLFVCENGAVKRLESILMSGKFTVRE
RKKVLEKVVEKNHFNYNEEQRLAILDALKEKIMILTGGPGTGKTTTTLGIIQALEEINQK
ILIAAPTGRAAKRLSEITGKESKTIHRLLEFSLLEGFNRNENNPLDCNVVIVDEFSMVDI
VLFYHLLKAVPDSASLIFIGDVDQLPSVGPGNVLQDLIGSGLIKTVYLKEIFRQGKESKI
ITNAHLINKGIFPQVNNNEDDDFFYIKEVKRERIFTLIKKLCQERLPKKYGVDPINDVQV
LVPVKKGIVSTKTINELFQNTFNPLGPAIVSGEYTFRVKDKVMQLKNNYDKNVFNGDIGR
IAEVDESDSSLLVQFENELISYEHTELDELQLAYAITIHKSQGSEYPVVIMPLVNQHFMM
LQKNLIYTGLTRAKKLFILIGNDKALAIALEKDTIDKRNTSLKEKLSLLLEKWRI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactagtcggaatagttgagagaatcgtttatcaaaatgaagaaaatggtttt
actgttctacgattaagagaagaattgaaaaataatttaattactgtaacaggctatttt
gccggtatttcagtcggccttttacttgaagcaaagggccgatttggtgtttttaaatat
ggagaacagtttgaagcttctgaatataaagaacatttacctaactctcttgaaggcatt
gagaaatacttatcaagtggtttaattaaaggagttggagcagtttatggcaaaaagata
gttaactactttaaagaggatacactggagatacttgaaaaatatcctgaaaggttactt
gaaatagaaggtattggtgagaaaaaatatgagcagattgtttcttcttatcaaggtcaa
agagaaataaaggatgttatgatatttctacaaagtcatggggtgtcatctacttatgct
ttaaaaatatataaaacatataaaaatgatagcataagaattgtttctgaaaatccctat
gctttagctgaagatgtgtttggcataggttttcatattgctgaccgaatagcttctaca
atgggctttgaaagagaatctttaaaacgagctaaagctggattacgttatttgctaatt
cagaacagtggcaaaggtcatgtttatgtagataaaaaaaacttactaactgaaggagaa
gctctattaggagtttcagcctatttacttgaggatagtcttgattgtatgattatggat
gatgaggcgattttcgaaagtccagaagctatttatcttccttcattgtttgtttgtgaa
aatggagcggtaaagaggctggaatcaattttaatgagtggcaaatttacagtaagggaa
agaaaaaaagttctagaaaaagttgttgagaaaaatcattttaactataatgaagaacag
agactagctattttagatgctttaaaagaaaaaattatgattttaactggaggcccagga
acgggtaagacaaccacaacattaggcatcattcaagctttagaggagattaatcaaaaa
attctaattgctgcgccaacaggaagagctgcaaaacgcttaagtgaaattacaggtaaa
gaaagcaaaactattcatcgtttattagagttttctcttctagaaggttttaatagaaat
gaaaataatcctctagattgtaatgtagtaatagtagatgaattttctatggttgatatt
gtacttttttatcatttacttaaagcagttccagattctgcatcattaatttttattgga
gatgttgatcaactaccttcagttggtcctggtaacgtgttgcaggatttgattggttct
ggcttaatcaaaacggtttacctaaaagagatttttagacagggtaaggaaagtaaaatt
attactaatgcacacttaataaataaagggatttttcctcaagttaataataatgaagat
gatgatttcttttatattaaagaagttaagagagaacgtatttttactttaataaaaaag
ctatgccaagaaagattgcctaaaaaatatggtgtggatccaattaatgatgttcaagta
ttagtacctgttaaaaaaggaattgttagtacaaagacaataaatgagctattccagaat
acatttaatccattaggtccagctattgtttctggagagtatacttttagggtaaaggat
aaagtgatgcagttaaaaaataactatgataaaaatgtatttaatggagatattgggaga
atagcagaagttgatgaaagtgatagtagtttgttagtacagtttgaaaatgaattaatt
tcctacgagcatactgagctggatgagcttcaattagcctatgctattactattcataaa
agccaggggagtgagtatccagttgttataatgcctctagtcaatcagcattttatgatg
cttcagaaaaacttgatttacacaggattaactagagctaaaaaattatttatattaata
ggcaatgataaagccctagctattgcacttgaaaaagatactattgataaaaggaataca
agccttaaggaaaaactgagtttgctactggaaaaatggaggatttaa
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