Endosymbiont 'TC1' of Trimyema compressum: AZF37_05675
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Entry
AZF37_05675 CDS
T07734
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ett
Endosymbiont 'TC1' of Trimyema compressum
Pathway
ett03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ett00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZF37_05675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ett03019
]
AZF37_05675
Messenger RNA biogenesis [BR:
ett03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZF37_05675
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
HDOD
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
AMP20732
UniProt:
A0A191HV59
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All DBs
Position
complement(932882..934441)
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AA seq
519 aa
AA seq
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MTTTPLFAVLIAIVTAIVGIILGYILRRVLSEGKLKNAEMLSKDIVEKAEKEAITKQKEA
IIEAKEQIQKMKEKMHGEIEKEQRERKFEWQQTEKRLHSKEESIDKKQQNLEKKEDKIHH
KEQEVCRLKESAKAVYYEQMAKLQEVSNMTSDEAKEFLLENVEQEIRQETAVLVRDMRDK
AKEEADKEAKEIVVRTIQKCATDHVAEATVYVVSLPNDEMKGRIIGREGRNIRALETVTG
IDLIIDDTPEAVILSGFDPVRREIARITLEKLITDGRIHPGRIEEMYEKAKTEVEKEIRE
AGEQAVLETGITRIHPELIKLIGRLKYRTSYGQNILKHSLEVAHLSATMAFELGADPNIA
RRAGLLHDIGKAVDHEVEGTHVEIGVNLLQKYKETPTIIHAVEAHHGDVEPETMEAVIVQ
IADSLSAARPGARRETLESYIKRLQKLEEIADGFEGVDKSFAIQAGREVRIMVKPDKIDD
LETINLTRAIVKEIESEMDYPGQIKVMVIRETRSVDYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacaccactattcgcagtactgatagctattgttacagccattgttggtatt
attttaggttatattctaagaagagtgttatcggaaggcaaattaaagaatgctgaaatg
ctatcgaaagatattgtagaaaaagcggaaaaggaagctattactaagcaaaaagaagct
atcattgaagcaaaagaacaaattcaaaaaatgaaagaaaaaatgcatggcgaaattgag
aaagaacaaagagaaagaaaatttgaatggcaacaaacagaaaaacgtctacacagtaaa
gaagaaagcattgataaaaaacagcaaaatctagaaaaaaaagaagataaaattcatcat
aaagagcaggaagtatgtcgcttaaaagagtctgctaaagcagtttactatgaacaaatg
gctaaactacaagaagtttccaatatgacgtctgatgaagcaaaagagtttttactagaa
aatgttgaacaggaaattcgccaagaaacagctgttttagttagagatatgagagataag
gcaaaagaagaagcggataaggaagctaaagaaattgttgtaagaacaattcaaaaatgt
gcaacagatcatgttgctgaagcaactgtatatgttgtatcattgcccaatgatgaaatg
aagggcaggattattggtcgtgagggcagaaatattagggctctagaaactgtaactggt
attgacttaattattgatgatacgccagaggctgtaattctttcagggtttgatcctgtg
agaagagaaattgctagaattacattagaaaaattaataactgacggcagaatacaccca
ggtcgtatagaagaaatgtatgaaaaagcaaaaacagaagttgaaaaagagattagagaa
gctggagaacaagctgttcttgaaacaggtattacacgtattcacccagaattaattaaa
ttaattggacgtctgaaatacagaaccagctatggtcaaaatatattaaaacattctttg
gaagttgctcatttatcagctacaatggcttttgaattaggtgctgatccaaatattgca
agacgtgcaggattacttcatgatattggtaaagcagtggatcacgaagttgaaggtacg
catgttgagattggtgttaatttgcttcagaagtataaagaaacaccaacaattattcat
gcagttgaagcccatcatggtgatgttgaaccagaaacaatggaagcagtaattgttcaa
attgctgattctttatcagcagcaagacctggagcaagacgtgaaactttagaatcctat
attaagcgtcttcaaaaacttgaagaaattgctgatggattcgaaggtgttgataaatca
tttgctattcaggctggtcgtgaagttcgtattatggttaaaccggataaaattgatgat
ttagaaaccattaacttaacacgtgcaattgtaaaagaaattgaatctgaaatggactat
ccaggacagattaaagttatggttatcagagagactcgctctgttgattacgcaaaatag
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